RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 OPLAHO14841 1288 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 FFAR3O14843 346 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 GPR42O15529 346 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 TFEBP19484 476 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 RTP1P59025 263 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 NAB1Q13506 487 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 INSCQ1MX18 579 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 C9orf57Q5W0N0 161 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ELMO1Q92556 727 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 BBS4Q96RK4 519 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 ASAH2Q9NR71 780 aa12.96□□□□□ -0.33
CHD4-211ENST00000544484 TLR5O60602 858 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 SNHG28P0DPA3 235 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 S100A3P33764 101 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 STXBP5Q5T5C0 1151 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 ARHGAP17Q68EM7 881 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 DUPD1Q68J44 220 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 TNS4Q8IZW8 715 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 OR6Y1Q8NGX8 325 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 PPTC7Q8NI37 304 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 SNRNP27Q8WVK2 155 aaKnown RBP12.96□□□□□ -0.34
CHD4-211ENST00000544484 CKAP2Q8WWK9 683 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 ZC4H2Q9NQZ6 224 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 MSI1O43347 362 aaKnown RBP12.96□□□□□ -0.34
CHD4-211ENST00000544484 DGKAP23743 735 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 PTPRNQ16849 979 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 CFAP52Q8N1V2 620 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 STAG3L4Q8TBR4 150 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 SELENOMQ8WWX9 145 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 ART4Q93070 314 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 DUSP16Q9BY84 665 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 MRPS23Q9Y3D9 190 aaKnown RBP12.96□□□□□ -0.34
CHD4-211ENST00000544484 AP4S1Q9Y587 144 aa12.96□□□□□ -0.34
CHD4-211ENST00000544484 CNTNAP1P78357 1384 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MAP2K7O14733 419 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 RGS14O43566 566 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 NTRK1P04629 796 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 FCGR1AP12314 374 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 SNRPD1P62314 119 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 IRF8Q02556 426 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 TRIP4Q15650 581 aaPredicted RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 PSMD5Q16401 504 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 USP41Q3LFD5 358 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 DUSP28Q4G0W2 176 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 TMEM26Q6ZUK4 368 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 OR6K2Q8NGY2 324 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 PIWIL2Q8TC59 973 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 FCRL2Q96LA5 508 aaPredicted RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 SYBUQ9NX95 663 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 CSH1P0DML2 217 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 CSH2P0DML3 217 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 RPL9P32969 192 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 OR1D2P34982 312 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 DCLRE1AQ6PJP8 1040 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 PYDC1Q8WXC3 89 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 CPXM1Q96SM3 734 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 RHBGQ9H310 441 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 CAB39Q9Y376 341 aaPredicted RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 BTNL10A8MVZ5 291 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 HS6ST1O60243 411 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 ZNF862O60290 1169 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MTA2O94776 668 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MARSP56192 900 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 NUP107P57740 925 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MRPS22P82650 360 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 TYW3Q6IPR3 259 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 STK40Q8N2I9 435 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 LRRC52Q8N7C0 313 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 OR52K2Q8NGK3 314 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 KRCC1Q9NPI7 259 aaPredicted RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 COL20A1Q9P218 1284 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 ZNF541Q9H0D2 1346 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 C1orf232A0A0U1RR37 186 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 SNTNA6NMZ2 147 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 BTBD19C9JJ37 291 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 FSCN2O14926 492 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 TREHO43280 583 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 ATG7O95352 703 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MMP3P08254 477 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 FGFR3P22607 806 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 LRPAP1P30533 357 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 SLC34A1Q06495 639 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 FGD3Q5JSP0 725 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 CCDC149Q6ZUS6 474 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 TMPRSS4Q9NRS4 437 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.95□□□□□ -0.346e-7■■□□□ 11.5
CHD4-211ENST00000544484 KLHL28Q9NXS3 571 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 GIT1Q9Y2X7 761 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 LDLRP01130 860 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 TCF3P15923 654 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 PSMB9P28065 219 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 SERPINB1P30740 379 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 HNRNPH3P31942 346 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 RBM23Q86U06 439 aaKnown RBP12.95□□□□□ -0.34
CHD4-211ENST00000544484 DEFB118Q96PH6 123 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 SLC25A23Q9BV35 468 aa12.95□□□□□ -0.34
CHD4-211ENST00000544484 LYPLA2O95372 231 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 SLC25A3Q00325 362 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 DUSP4Q13115 394 aa12.94□□□□□ -0.34
CHD4-211ENST00000544484 EIF2B5Q13144 721 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms