RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 PIP5K1AQ99755 562 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 TREX2Q9BQ50 279 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-207ENST00000544052 ZNF747Q9BV97 191 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 NPLQ9BXD5 320 aaPredicted RBP4.01□□□□□ -1.77
SCFD1-207ENST00000544052 CPNE5Q9HCH3 593 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 Q9N2J8 555 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 SEPT11Q9NVA2 429 aaKnown RBP4.01□□□□□ -1.77
SCFD1-207ENST00000544052 ASB6Q9NWX5 421 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 PPP1R14DQ9NXH3 145 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 KCND2Q9NZV8 630 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 HCN3Q9P1Z3 774 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 TBC1D29Q9UFV1 150 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 OSGIN2Q9Y236 505 aa4.01□□□□□ -1.77
SCFD1-207ENST00000544052 CEP170BQ9Y4F5 1589 aaPredicted RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 NCOA1Q15788 1441 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 KIAA1107Q9UPP5 1409 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 DNMT1P26358 1616 aaKnown RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 GOLGA6L10A0A0M3HER8 536 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 C1QTNF3-AMACRE9PGA6 284 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 SMIM22K7EJ46 135 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 IFNL4K9M1U5 179 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 HSP90AA1P07900 732 aaKnown RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 FCGR2AP12318 317 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 ST6GAL1P15907 406 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 KRT4P19013 534 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 HOXD13P35453 343 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 MLH1P40692 756 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 ARF3P61204 181 aaPredicted RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 ARF1P84077 181 aaKnown RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 TAP1Q03518 808 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 SEMA3AQ14563 771 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 VSTM1Q6UX27 236 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM217Q8N7C4 229 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 PDILTQ8N807 584 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 KLHL15Q96M94 604 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 FCRL5Q96RD9 977 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 FRMD8Q9BZ67 464 aaPredicted RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 NLKQ9UBE8 527 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 DTX4Q9Y2E6 619 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 A2MP01023 1474 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 CAMSAP2Q08AD1 1489 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 NCOA2Q15596 1464 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 PTPRKQ15262 1439 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 UHRF1BP1Q6BDS2 1440 aa4□□□□□ -1.77
SCFD1-207ENST00000544052 RNF17Q9BXT8 1623 aaKnown RBP4□□□□□ -1.77
SCFD1-207ENST00000544052 ARHGEF5Q12774 1597 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TARSL2A2RTX5 802 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TARM1B6A8C7 271 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 H7C1Q1 480 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 AP3D1O14617 1153 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 LDLRAD4O15165 306 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CEP104O60308 925 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CBX6O95503 412 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 MLYCDO95822 493 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CHRM4P08173 479 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SPARCP09486 303 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 ACADMP11310 421 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 EFNA5P52803 228 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 RHAGQ02094 409 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 NUCB1Q02818 461 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 MED22Q15528 200 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 PFKFB3Q16875 520 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 KRTAP5-3Q6L8H2 238 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CHSY1Q86X52 802 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 ADSSL1Q8N142 457 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 ETNPPLQ8TBG4 499 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 ERP27Q96DN0 273 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 C5orf34Q96MH7 638 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TIGD1Q96MW7 591 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 NUDT16L1Q9BRJ7 211 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TM2D2Q9BX73 214 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CADM1Q9BY67 442 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 RANBP17Q9H2T7 1088 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 EIF2B3Q9NR50 452 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SMYD2Q9NRG4 433 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 IL1RAPL1Q9NZN1 696 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 HSPB7Q9UBY9 170 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SERGEFQ9UGK8 458 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 ALKQ9UM73 1620 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 MAST1Q9Y2H9 1570 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 XIRP1Q702N8 1843 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TEX13CA0A0J9YWL9 993 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 PABPN1LA6NDY0 278 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TMEM232C9JQI7 657 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SNAP23O00161 211 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 HBP1O60381 514 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 JTBO76095 146 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 TUBB4AP04350 444 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 SOX2P48431 317 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 OAZ1P54368 228 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 NAP1L1P55209 391 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 NEXNQ0ZGT2 675 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 CCNG2Q16589 344 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 GLE1Q53GS7 698 aaKnown RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 C17orf99Q6UX52 265 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 GRASPQ7Z6J2 395 aaPredicted RBP3.99□□□□□ -1.77
SCFD1-207ENST00000544052 KLBQ86Z14 1044 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 GHDCQ8N2G8 530 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 HSPH1Q92598 858 aa3.99□□□□□ -1.77
SCFD1-207ENST00000544052 USP6NLQ92738 828 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms