RNA–Protein interactions for RNA: ENST00000544040.5

CHD4-210, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CHD4, Length 6,514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-210ENST00000544040 SETD4Q9NVD3 440 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 RWDD3Q9Y3V2 267 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 PRDM15P57071 1507 aaPredicted RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 PSMB4P28070 264 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 NTSP30990 170 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 RPL4P36578 427 aaKnown RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 SREBF1P36956 1147 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 MADCAM1Q13477 382 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 KYAT3Q6YP21 454 aaKnown RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 OR52K1Q8NGK4 314 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 BHLHE41Q9C0J9 482 aaPredicted RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 ZDHHC6Q9H6R6 413 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 BPIFA1Q9NP55 256 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 DISP1Q96F81 1524 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 ANKDD1BA6NHY2 528 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 TFECO14948 347 aaPredicted RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 MIPP30301 263 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 SFSWAPQ12872 951 aaKnown RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 EPS8Q12929 822 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 MARK2Q7KZI7 788 aaKnown RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 MAT2BQ9NZL9 334 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 TRIM3O75382 744 aaPredicted RBP15.63■□□□□ 0.09
CHD4-210ENST00000544040 CST1P01037 141 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 OMPP47874 163 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 CDK7P50613 346 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 TNK2Q07912 1038 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 IL18R1Q13478 541 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 VPS72Q15906 364 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 TCEAL5Q5H9L2 206 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 FAM171BQ6P995 826 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 FBXO33Q7Z6M2 555 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 TRAPPC5Q8IUR0 188 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 LRRC7Q96NW7 1537 aa15.63■□□□□ 0.09
CHD4-210ENST00000544040 FAM92AA1XBS5 289 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 KPNA6O60684 536 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 RPN2P04844 631 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CHRNGP07510 517 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 NR2C2P49116 596 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 HUNKP57058 714 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 SPIBQ01892 262 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 HYIQ5T013 277 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 OVOS1Q6IE37 1185 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 LINC00116Q8NCU8 138 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 MYDGFQ969H8 173 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 VPS51Q9UID3 782 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 PCDHA11Q9Y5I1 949 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 TKTP29401 623 aaKnown RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 BCL2L1Q07817 233 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 POM121L1PQ3SYA9 428 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CCSAPQ6IQ19 270 aaPredicted RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 ALYREFQ86V81 257 aaKnown RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 ZNF34Q8IZ26 560 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 TRIT1Q9H3H1 467 aaKnown RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 MGRN1O60291 552 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CCDC166P0CW27 439 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 COPZ1P61923 177 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 FOLH1Q04609 750 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 AMER2Q8N7J2 671 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 ETNPPLQ8TBG4 499 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 SLC2A14Q8TDB8 520 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 FAM126AQ9BYI3 521 aaPredicted RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 RSL24D1Q9UHA3 163 aaKnown RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 TRHDEQ9UKU6 1024 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 KPNA1P52294 538 aaPredicted RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 PIGKQ92643 395 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 A0A0B4J269 797 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CSF1RP07333 972 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 SNRPB2P08579 225 aaKnown RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 FCGRTP55899 365 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 MED22Q15528 200 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CYP2A13Q16696 494 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 SETMARQ53H47 684 aaPredicted RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 BRSK2Q8IWQ3 736 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 CYP4X1Q8N118 509 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 SCAIQ8N9R8 606 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 TLR10Q9BXR5 811 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 TNKS2Q9H2K2 1166 aa15.62■□□□□ 0.09
CHD4-210ENST00000544040 MTF2Q9Y483 593 aaPredicted RBP15.62■□□□□ 0.09
CHD4-210ENST00000544040 GPR75-ASB3A0A0A6YYF3 556 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 F8VP50 259 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 RECQL5O94762 991 aaPredicted RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 MTA2O94776 668 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 GRIA4P48058 902 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 FNDC3BQ53EP0 1204 aaKnown RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 GPR156Q8NFN8 814 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 GTF3C2Q8WUA4 911 aaPredicted RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 SPG21Q9NZD8 308 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 C15orf38-AP3S2A0A0A6YYH1 394 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 HAT1O14929 419 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 IFNA16P05015 189 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 HNF4AP41235 474 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 PSME3P61289 254 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 SQLEQ14534 574 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 ARPINQ7Z6K5 226 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 PTGR2Q8N8N7 351 aaPredicted RBP15.61■□□□□ 0.09
CHD4-210ENST00000544040 KAT5Q92993 513 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 PLGRKTQ9HBL7 147 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 EURLQ9NYK6 297 aa15.61■□□□□ 0.09
CHD4-210ENST00000544040 DDX3XO00571 662 aaKnown RBP eCLIP15.61■□□□□ 0.097e-17■■□□□ 14
CHD4-210ENST00000544040 ACSL4O60488 711 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms