RNA–Protein interactions for RNA: ENST00000543766.2

VPS13D-212, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2 BASIC

Gene VPS13D, Length 3,838 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-212ENST00000543766 ILVBLA1L0T0 632 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 INPPL1O15357 1258 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 CIAO1O76071 339 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 CRTAMO95727 393 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 LYNP07948 512 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RPIAP49247 311 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 PPARAQ07869 468 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 PLS1Q14651 629 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF530Q6P9A1 599 aaPredicted RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 BHLHB9Q6PI77 547 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ATG14Q6ZNE5 492 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SV2BQ7L1I2 683 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ANKS1BQ7Z6G8 1248 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 GPR149Q86SP6 731 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SATL1Q86VE3 508 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 OR5H6Q8NGV6 325 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 PPP1R35Q8TAP8 253 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF596Q8TC21 504 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RASSF5Q8WWW0 418 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF317Q96PQ6 595 aaPredicted RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TRIM2Q9C040 744 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ZNF69Q9UC07 566 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 LIMA1Q9UHB6 759 aaKnown RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SNX12Q9UMY4 172 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 BRWD3Q6RI45 1802 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 A0A1B0GTQ1 180 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 A0A1B0GV90 55 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 KRT37O76014 449 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 HOXB7P09629 217 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 FAM153BP0C7A2 387 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RD3LP0DJH9 198 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 NFKB1P19838 968 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TUBG1P23258 451 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 GPD2P43304 727 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 COPZ1P61923 177 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 GALK2Q01415 458 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 FAM153CQ494X1 144 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SAPCD1Q5SSQ6 148 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 MLIPQ5VWP3 458 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TYW1BQ6NUM6 668 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TRMT11Q7Z4G4 463 aaKnown RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RBBP8NLQ8NC74 664 aaPredicted RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 DAGLBQ8NCG7 672 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 FAM216AQ8WUB2 273 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 ATG4CQ96DT6 458 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SLC10A4Q96EP9 437 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 CLUHP3Q96NS8 147 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 FERMT1Q9BQL6 677 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 SARGQ9BW04 601 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 PINK1Q9BXM7 581 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 OPN3Q9H1Y3 402 aaPredicted RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RANBP3Q9H6Z4 567 aaPredicted RBP9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TUBG2Q9NRH3 451 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 KCNH7Q9NS40 1196 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 STOML1Q9UBI4 398 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 TINAGQ9UJW2 476 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 PCDHA12Q9UN75 941 aa9.02□□□□□ -0.97
VPS13D-212ENST00000543766 RGPD5Q99666 1765 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 RCCD1A6NED2 376 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 F8W036 122 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 MT-CO1P00395 513 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ASNSP08243 561 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SNRNP70P08621 437 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CD40LGP29965 261 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CSTF2P33240 577 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SLC12A3P55017 1021 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 C21orf59P57076 290 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GRSF1Q12849 480 aaKnown RBP eCLIP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GPR176Q14439 515 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 UAP1Q16222 522 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 EPHA10Q5JZY3 1008 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 YOD1Q5VVQ6 348 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 WDR59Q6PJI9 974 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 VPS37DQ86XT2 251 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CENPSQ8N2Z9 138 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ANGPTL6Q8NI99 470 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 HDAC10Q969S8 669 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 RAD51AP1Q96B01 352 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 EXOSC8Q96B26 276 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 FAM136AQ96C01 138 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GPRASP2Q96D09 838 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 OPALINQ96PE5 141 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CHP1Q99653 195 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 WDR12Q9GZL7 423 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 FAM212BQ9NTI7 297 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 TOR4AQ9NXH8 423 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 MPP6Q9NZW5 540 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ADAM22Q9P0K1 906 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 H2AFY2Q9P0M6 372 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 UXTQ9UBK9 157 aaPredicted RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 CNOT8Q9UFF9 292 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 DIMT1Q9UNQ2 313 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SLC27A5Q9Y2P5 690 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 SMIM30A4D0T7 59 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 PMS2P1A4D2B8 440 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 MOXD2PA6NHM9 499 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GTPBP1O00178 669 aaKnown RBP9.01□□□□□ -0.97
VPS13D-212ENST00000543766 AQP9O43315 295 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 GMFGO60234 142 aa9.01□□□□□ -0.97
VPS13D-212ENST00000543766 ACSL3O95573 720 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms