RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 HALP42357 657 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 PTDSS1P48651 473 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 PIK3CGP48736 1102 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 NDUFV1P49821 464 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ALDH5A1P51649 535 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ADARP55265 1226 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 EIF4A1P60842 406 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 BASP1P80723 227 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 EXOSC10Q01780 885 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MCL1Q07820 350 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 HNRNPA0Q13151 305 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MSLNQ13421 630 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 KARSQ15046 597 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 DPCR1Q3MIW9 517 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 GALNTL6Q49A17 601 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 SMUG1Q53HV7 270 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 HSP90AA5PQ58FG0 334 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ZNF804AQ7Z570 1209 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 PIGWQ7Z7B1 504 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 DAAM2Q86T65 1068 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 RAB11FIP4Q86YS3 637 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ST13P4Q8IZP2 240 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 SLC7A5P1Q8MH63 180 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 NUP93Q8N1F7 819 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ESX1Q8N693 406 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 FSIP1Q8NA03 581 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 GABPB2Q8TAK5 448 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 NOC3LQ8WTT2 800 aaKnown RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 INPP5DQ92835 1189 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 SARAFQ96BY9 339 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 CCDC42Q96M95 316 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ZIM3Q96PE6 472 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 SIKE1Q9BRV8 207 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 FAM167BQ9BTA0 163 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 HGH1Q9BTY7 390 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 TXLNGQ9NUQ3 528 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 PANK4Q9NVE7 773 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 FKBP14Q9NWM8 211 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 COMMD8Q9NX08 183 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 RHBDL2Q9NX52 303 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 EURLQ9NYK6 297 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ADAM22Q9P0K1 906 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 THEGQ9P2T0 379 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 DBF4Q9UBU7 674 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 MTUS1Q9ULD2 1270 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 POLHQ9Y253 713 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.09□□□□□ -1.43
XRCC4-206ENST00000542685 GLI3P10071 1580 aa6.09□□□□□ -1.43
XRCC4-206ENST00000542685 BCL9LQ86UU0 1499 aa6.09□□□□□ -1.44
XRCC4-206ENST00000542685 WNK3Q9BYP7 1800 aa6.09□□□□□ -1.44
XRCC4-206ENST00000542685 MST1RQ04912 1400 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ADGRA2Q96PE1 1338 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 A0A0D9SFI3 127 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PRSS29PA6NIE9 313 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 E9PMD0 336 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 H3BQV1 296 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 NVLO15381 856 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 TRIAP1O43715 76 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SH3BP5O60239 455 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SUPT3HO75486 399 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 LCA5LO95447 670 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 TCP1P17987 556 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 KCNA3P22001 575 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 TMOD1P28289 359 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PRDX5P30044 214 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ABCG1P45844 678 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 CDK7P50613 346 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 EIF3BP55884 814 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 NCALDP61601 193 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 KRT83P78385 493 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 FOXF2Q12947 444 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 HABP2Q14520 560 aaPredicted RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 WTAPQ15007 396 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ZCWPW2Q504Y3 356 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 LIN52Q52LA3 116 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 TAF2Q6P1X5 1199 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SLC2A7Q6PXP3 512 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 MARK2Q7KZI7 788 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ASRGL1Q7L266 308 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 RASAL3Q86YV0 1011 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 WDR75Q8IWA0 830 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SRRM1Q8IYB3 904 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 NECAB1Q8N987 351 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SPERTQ8NA61 448 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 LINC00301Q8NCQ3 95 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PPFIBP2Q8ND30 876 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PSD4Q8NDX1 1056 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 IL17REQ8NFR9 667 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 FNDC8Q8TC99 324 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 KLHL29Q96CT2 875 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 LTV1Q96GA3 475 aaPredicted RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ANKRD36BP1Q96IX9 119 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 XPO6Q96QU8 1125 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 CNPPD1Q9BV87 410 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 SEZ6LQ9BYH1 1024 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 ASPSCR1Q9BZE9 553 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 FAM129AQ9BZQ8 928 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 DCLRE1BQ9H816 532 aa6.08□□□□□ -1.44
XRCC4-206ENST00000542685 PIH1D3Q9NQM4 214 aaKnown RBP6.08□□□□□ -1.44
XRCC4-206ENST00000542685 RLIMQ9NVW2 624 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms