RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 PHACTR3Q96KR7 559 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 TTC25Q96NG3 672 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 TMEM79Q9BSE2 394 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 CINPQ9BW66 212 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 CDK19Q9BWU1 502 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 TEKT3Q9BXF9 490 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 C1QTNF7Q9BXJ2 289 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 NT5C3AQ9H0P0 336 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 WNT5BQ9H1J7 359 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 MYLK2Q9H1R3 596 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 ADAM7Q9H2U9 754 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 TP63Q9H3D4 680 aaPredicted RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 KCTD10Q9H3F6 313 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 MROH8Q9H579 483 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 DHX33Q9H6R0 707 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 AZI2Q9H6S1 392 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 MMRN2Q9H8L6 949 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 CAB39LQ9H9S4 337 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 SP110Q9HB58 689 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 NTN4Q9HB63 628 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 ANKHQ9HCJ1 492 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 INTS7Q9NVH2 962 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 NKIRAS1Q9NYS0 192 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 PRR13Q9NZ81 148 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 WHRNQ9P202 907 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 PPARGC1AQ9UBK2 798 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 MALT1Q9UDY8 824 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 FAM153AQ9UHL3 310 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 EDARQ9UNE0 448 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 DIMT1Q9UNQ2 313 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 SORCS3Q9UPU3 1222 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 AGTPBP1Q9UPW5 1226 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 DTX4Q9Y2E6 619 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 VWA7Q9Y334 891 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 REXO2Q9Y3B8 237 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 ASB4Q9Y574 426 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 CPQQ9Y646 472 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 PTCH2Q9Y6C5 1203 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 PHRF1Q9P1Y6 1649 aaKnown RBP4.42□□□□□ -1.7
SNHG1-219ENST00000542112 WNK3Q9BYP7 1800 aa4.42□□□□□ -1.7
SNHG1-219ENST00000542112 MST1RQ04912 1400 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 NCAPD2Q15021 1401 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 A0A087WXM4 84 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ARGFXA6NJG6 315 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF98A6NK75 572 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MEI4A8MW99 385 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ZNF487B1APH4 448 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PRRT4C9JH25 899 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ATP6V1G2-DDX39BF2Z307 99 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 hCG_2039718K7EN88 272 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 WRBO00258 174 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TXNDC9O14530 226 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 POLR2DO15514 142 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 DYNC1LI2O43237 492 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 HOXC11O43248 304 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MSI1O43347 362 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 AKAP10O43572 662 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SRGAP2O75044 1071 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ATG13O75143 517 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PTP4A3O75365 173 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 GCATO75600 419 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KRT36O76013 467 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OR7A10O76100 309 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 OR6B1O95007 311 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CSPG5O95196 566 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SNX4O95219 450 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TGDSO95455 350 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 LARGE1O95461 756 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SNAP29O95721 258 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 TGM6O95932 706 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 IL1BP01584 269 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 KRT1P04264 644 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SHBGP04278 402 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CALB1P05937 261 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MYL3P08590 195 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 T-ENOLP0DO92 83 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 THRAP10827 490 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ITGA4P13612 1032 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PDGFRAP16234 1089 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ARF4P18085 180 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RAB3AP20336 220 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RBL1P28749 1068 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 ECHS1P30084 290 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 NMT1P30419 496 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SERPINB1P30740 379 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 CIITAP33076 1130 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FDFT1P37268 417 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PPP1R2P41236 205 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 RECQLP46063 649 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 MTIF2P46199 727 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 GNPDA1P46926 289 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FXR1P51114 621 aaKnown RBP eCLIP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 SLC5A3P53794 718 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 C21orf58P58505 322 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 HERVK_113P62684 666 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 EEF1A1P68104 462 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 PRAMEP78395 509 aa4.41□□□□□ -1.7
SNHG1-219ENST00000542112 FLI1Q01543 452 aaPredicted RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 EEF1A2Q05639 463 aaKnown RBP4.41□□□□□ -1.7
SNHG1-219ENST00000542112 AUHQ13825 339 aaKnown RBP4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms