RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 CSF1P09603 554 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 LYL1P12980 280 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 PRF1P14222 555 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 KLRC2P26717 231 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 CCT4P50991 539 aaKnown RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 CLNS1AP54105 237 aaKnown RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 RHAGQ02094 409 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 CHRNDQ07001 517 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 SMTNL2Q2TAL5 461 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 MANEAQ5SRI9 462 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 C6orf10Q5SRN2 563 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 FAM171A1Q5VUB5 890 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 ZNF280DQ6N043 979 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 BBS12Q6ZW61 710 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 RNF144BQ7Z419 303 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 GALNT7Q86SF2 657 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 CCDC25Q86WR0 208 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 BRSK2Q8IWQ3 736 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 USP38Q8NB14 1042 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 LINS1Q8NG48 757 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 KAT2AQ92830 837 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 ZNF419Q96HQ0 510 aaPredicted RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 PPP1R10Q96QC0 940 aaKnown RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 TWNKQ96RR1 684 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 IFT27Q9BW83 186 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 CADM1Q9BY67 442 aaKnown RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 FOXP1Q9H334 677 aaPredicted RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 SLC22A11Q9NSA0 550 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 OLA1Q9NTK5 396 aaKnown RBP3.5□□□□□ -1.85
USP28-210ENST00000542033 DECR2Q9NUI1 292 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 POT1Q9NUX5 634 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 TMEM160Q9NX00 188 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 CLIC5Q9NZA1 410 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 MSRB1Q9NZV6 116 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 COG5Q9UP83 839 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 DNAJC16Q9Y2G8 782 aa3.5□□□□□ -1.85
USP28-210ENST00000542033 SETD1BQ9UPS6 1966 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 A0A087X0M5 115 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 A0A1B0GX30 115 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 MYMKA6NI61 221 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TLX3O43711 291 aaPredicted RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 STRNO43815 780 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ZNF500O60304 480 aaPredicted RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 TSPAN3O60637 253 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TULP3O75386 442 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 NEURL1O76050 574 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 METTL18O95568 372 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 SYF2O95926 243 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 WNT1P04628 370 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 CNPP09543 421 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 ATP1A3P13637 1013 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 CPA1P15085 419 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TYK2P29597 1187 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 SKIV2L2P42285 1042 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 NR4A2P43354 598 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ALDH7A1P49419 539 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 TUBP50607 506 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 CCR5P51681 352 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ARHGAP8P85298 464 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 SRSF1Q07955 248 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP28-210ENST00000542033 INPP5JQ15735 1006 aaPredicted RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 C5orf22Q49AR2 442 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 CBWD5Q5RIA9 395 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 PIK3CD-AS1Q5SR53 167 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 HMBOX1Q6NT76 420 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 NEK10Q6ZWH5 1172 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TRAPPC11Q7Z392 1133 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ANKRD23Q86SG2 305 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 PIM3Q86V86 326 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TCP11L2Q8N4U5 519 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 DPP10Q8N608 796 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TMEM217Q8N7C4 229 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 C2CD4CQ8TF44 421 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 IGFBPL1Q8WX77 278 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 RFFLQ8WZ73 363 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 EME1Q96AY2 570 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 HVCN1Q96D96 273 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ERP27Q96DN0 273 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 NLRP4Q96MN2 994 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ZNF48Q96MX3 618 aaPredicted RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 C7orf26Q96N11 449 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TREX2Q9BQ50 279 aaPredicted RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 WDR83Q9BRX9 315 aaKnown RBP3.49□□□□□ -1.85
USP28-210ENST00000542033 HERC2P3Q9BVR0 1158 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 GPR63Q9BZJ6 419 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 XRN2Q9H0D6 950 aaKnown RBP eCLIP3.49□□□□□ -1.85
USP28-210ENST00000542033 TASP1Q9H6P5 420 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 PLEKHA5Q9HAU0 1116 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 PREBQ9HCU5 417 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 ZNF304Q9HCX3 659 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 TMEM248Q9NWD8 314 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 DHDHQ9UQ10 334 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 SLC45A1Q9Y2W3 748 aa3.49□□□□□ -1.85
USP28-210ENST00000542033 A0A1W2PPC1 479 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 FIBPO43427 364 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 HBP1O60381 514 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 WEE2P0C1S8 567 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 CHRNB1P11230 501 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 NEFHP12036 1026 aa3.48□□□□□ -1.85
USP28-210ENST00000542033 FCGR2AP12318 317 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms