RNA–Protein interactions for RNA: ENST00000542018.5

RAP1B-227, Transcript of RAP1B, member of RAS oncogene family, humanhuman

TSL 4

Gene RAP1B, Length 633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1B-227ENST00000542018 RRM1P23921 792 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 CCR1P32246 355 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 DUSP3P51452 185 aaPredicted RBP19.3■□□□□ 0.68
RAP1B-227ENST00000542018 KCNC4Q03721 635 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 ZNF177Q13360 481 aaPredicted RBP19.3■□□□□ 0.68
RAP1B-227ENST00000542018 MEA1Q16626 185 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 SPATA20Q8TB22 786 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 ZNF606Q8WXB4 792 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 MED15Q96RN5 788 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 DUSP23Q9BVJ7 150 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 HDAC8Q9BY41 377 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 SLC12A6Q9UHW9 1150 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 VPS51Q9UID3 782 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 PCDHGA8Q9Y5G5 932 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 HS3ST3A1Q9Y663 406 aa19.3■□□□□ 0.68
RAP1B-227ENST00000542018 SPTY2D1-AS1A0A0U1RR47 76 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 A6NNZ2 444 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ARHGAP6O43182 974 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 SPINT1O43278 529 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PCDH8O95206 1070 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 WISP1O95388 367 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 SLC2A3P11169 496 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 NME1P15531 152 aaKnown RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PDX1P52945 283 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 HNRNPKP61978 463 aaKnown RBP eCLIP19.29■□□□□ 0.681e-8■■■■■ 29.6
RAP1B-227ENST00000542018 CLN3Q13286 438 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PDCLQ13371 301 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 DRAP1Q14919 205 aaPredicted RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ALFQ53S48 1182 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ARSIQ5FYB1 569 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PERM1Q5SV97 790 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 OTUD1Q5VV17 481 aaPredicted RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ZCCHC8Q6NZY4 707 aaKnown RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 CRTC1Q6UUV9 634 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 KYAT3Q6YP21 454 aaKnown RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ERN2Q76MJ5 926 aaKnown RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 EFL1Q7Z2Z2 1120 aaKnown RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PTAR1Q7Z6K3 402 aaPredicted RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 ZNF683Q8IZ20 524 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 EHBP1Q8NDI1 1231 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 PPP1R9BQ96SB3 815 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 KLF6Q99612 283 aaPredicted RBP19.29■□□□□ 0.68
RAP1B-227ENST00000542018 WASF2Q9Y6W5 498 aa19.29■□□□□ 0.68
RAP1B-227ENST00000542018 DOCK4Q8N1I0 1966 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CPED1A4D0V7 1026 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 EME2A4GXA9 379 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 P4HA2O15460 535 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 SLC28A2O43868 658 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 PAGE1O75459 146 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CLDN11O75508 207 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 GRAP2O75791 330 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 LETM1O95202 739 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 PAK4O96013 591 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CD44P16070 742 aaKnown RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CDK17Q00537 523 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 LINGO4Q6UY18 593 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 DCP2Q8IU60 420 aaKnown RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 FMR1NBQ8N0W7 255 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 EXD3Q8N9H8 876 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 ATP11CQ8NB49 1132 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 GRIN3AQ8TCU5 1115 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 GBP4Q96PP9 640 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 GSDMAQ96QA5 445 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CPXM1Q96SM3 734 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 TNKS2Q9H2K2 1166 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 GDPD2Q9HCC8 539 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 RMND1Q9NWS8 449 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 PNMA8BQ9ULN7 279 aaPredicted RBP19.28■□□□□ 0.68
RAP1B-227ENST00000542018 CSNK1G3Q9Y6M4 447 aa19.28■□□□□ 0.68
RAP1B-227ENST00000542018 PTPN13Q12923 2485 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 A0A0D9SEW6 157 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 KRT5P13647 590 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 RBMS1P29558 406 aaKnown RBP19.27■□□□□ 0.68
RAP1B-227ENST00000542018 CDH4P55283 916 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 DEFB133Q30KQ1 61 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 DPY19L3Q6ZPD9 716 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 CLEC14AQ86T13 490 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 RNF34Q969K3 372 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 CEP63Q96MT8 703 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 SLC17A9Q9BYT1 436 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 MUC3BQ9H195 1237 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 SNX10Q9Y5X0 201 aa19.27■□□□□ 0.68
RAP1B-227ENST00000542018 AQP9O43315 295 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 LEFTY1O75610 366 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 PRNPP04156 253 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 GLI1P08151 1106 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 TFE3P19532 575 aaPredicted RBP19.26■□□□□ 0.67
RAP1B-227ENST00000542018 EIF2B5Q13144 721 aaKnown RBP19.26■□□□□ 0.67
RAP1B-227ENST00000542018 NME3Q13232 169 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 MAPK8IP2Q13387 824 aaPredicted RBP19.26■□□□□ 0.67
RAP1B-227ENST00000542018 ARL13BQ3SXY8 428 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 LINC00303Q3SY05 128 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 C22orf39Q6P5X5 142 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 RBM44Q6ZP01 1051 aaKnown RBP19.26■□□□□ 0.67
RAP1B-227ENST00000542018 PARGQ86W56 976 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 FAM174AQ8TBP5 190 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 VOPP1Q96AW1 172 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 GRAMD1AQ96CP6 724 aa19.26■□□□□ 0.67
RAP1B-227ENST00000542018 INTS2Q9H0H0 1204 aaKnown RBP19.26■□□□□ 0.67
RAP1B-227ENST00000542018 TCEAL2Q9H3H9 227 aaPredicted RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms