RNA–Protein interactions for RNA: ENST00000540728.6

CACNA2D4-211, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, humanhuman

TSL 2

Gene CACNA2D4, Length 596 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA2D4-211ENST00000540728 NAXDQ8IW45 347 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 PCDH20Q8N6Y1 951 aaKnown RBP17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 TMIEQ8NEW7 156 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 OR2A12Q8NGT7 310 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 TRIM11Q96F44 468 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 ACE2Q9BYF1 805 aaPredicted RBP17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 ANKRD6Q9Y2G4 727 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 PCDHB9Q9Y5E1 797 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 BZW2Q9Y6E2 419 aaKnown RBP17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 SLCO1B1Q9Y6L6 691 aa17.52■□□□□ 0.4
CACNA2D4-211ENST00000540728 A0A1W2PQJ5 194 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 CREB3O43889 395 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 SH3BP5O60239 455 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 ZMPSTE24O75844 475 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 TPM3P06753 285 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 SKILP12757 684 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 EPHB2P29323 1055 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 DNA2P51530 1060 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 SUZ12Q15022 739 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 POLD3Q15054 466 aaPredicted RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 KIF19Q2TAC6 998 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 TDRD12Q587J7 1177 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 SLC45A4Q5BKX6 768 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 ZNF354CQ86Y25 554 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 ARHGEF2Q92974 986 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 PPP1R16AQ96I34 528 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 CAMK1GQ96NX5 476 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 MAGEB5Q9BZ81 275 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 TNKS2Q9H2K2 1166 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 CATSPERBQ9H7T0 1116 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 IL21RQ9HBE5 538 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 AASDHPPTQ9NRN7 309 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 DONSONQ9NYP3 566 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 IL36AQ9UHA7 158 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 FZD10Q9ULW2 581 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 FNDC3AQ9Y2H6 1198 aaKnown RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 SCINQ9Y6U3 715 aa17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 KMT2BQ9UMN6 2715 aaPredicted RBP17.51■□□□□ 0.39
CACNA2D4-211ENST00000540728 IGF2RP11717 2491 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 PLK4O00444 970 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 DDX3XO00571 662 aaKnown RBP eCLIP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ATMINO43313 823 aaPredicted RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 PLRG1O43660 514 aaKnown RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 RNF8O76064 485 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 TOP3BO95985 862 aaKnown RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 MYBL1P10243 752 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 NUDT1P36639 197 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ACVRL1P37023 503 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 METAP1P53582 386 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ARF5P84085 180 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 BNC1Q01954 994 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 CARD16Q5EG05 197 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 E4F1Q66K89 784 aaPredicted RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 DPY19L3Q6ZPD9 716 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 PYROXD2Q8N2H3 581 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 GRIN3AQ8TCU5 1115 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 SYN2Q92777 582 aaPredicted RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 FAM131CQ96AQ9 280 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ZNF653Q96CK0 615 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ORAI3Q9BRQ5 295 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 MRPL47Q9HD33 250 aaKnown RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 TM7SF3Q9NS93 570 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 NDFIP2Q9NV92 336 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 CNOT8Q9UFF9 292 aaKnown RBP17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 SNX11Q9Y5W9 270 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 FRYQ5TBA9 3013 aa17.5■□□□□ 0.39
CACNA2D4-211ENST00000540728 ZSCAN5CA6NGD5 496 aaPredicted RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 EIF3CLB5ME19 914 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 VILLO15195 856 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 HYAL3O43820 417 aaPredicted RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 DFNA5O60443 496 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 CTSLP07711 333 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 CD38P28907 300 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 HTR7P34969 479 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 PBX1P40424 430 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 FAM193AP78312 1265 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 ZBED6P86452 979 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 OGDHQ02218 1023 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 ARSIQ5FYB1 569 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 AGBL4Q5VU57 503 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 RTL3Q8N8U3 475 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 CHST14Q8NCH0 376 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 SETD7Q8WTS6 366 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 CPLX3Q8WVH0 158 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 ISG20Q96AZ6 181 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 SERAC1Q96JX3 654 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 SLC6A18Q96N87 628 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 EIF3CQ99613 913 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 NCAPGQ9BPX3 1015 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 HEPHQ9BQS7 1158 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 SCNM1Q9BWG6 230 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 PREBQ9HCU5 417 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 IFNKQ9P0W0 207 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 NEU3Q9UQ49 428 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 DMTF1Q9Y222 760 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 FCF1Q9Y324 198 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 LUC7L2Q9Y383 392 aaKnown RBP17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 PCDHGB2Q9Y5G2 931 aa17.49■□□□□ 0.39
CACNA2D4-211ENST00000540728 TMEM191CA6NGB0 347 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms