RNA–Protein interactions for RNA: ENST00000540700.1

UBC-208, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-208ENST00000540700 PLK5Q496M5 336 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 KAZNQ674X7 775 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 MAP7D3Q8IWC1 876 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 RCOR2Q8IZ40 523 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 HHIPQ96QV1 700 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 HEMGNQ9BXL5 484 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 MUC3BQ9H195 1237 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 RETREG1Q9H6L5 497 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 ELOVL2Q9NXB9 296 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 VPS51Q9UID3 782 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 STARD13Q9Y3M8 1113 aa17.07■□□□□ 0.32
UBC-208ENST00000540700 TCRBV7S2A1N4TA0A589 114 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 GOLGA6L9A6NEM1 432 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 KIF5CO60282 957 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 ATG13O75143 517 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 TOP3BO95985 862 aaKnown RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 MT-CO1P00395 513 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 PECAM1P16284 738 aaPredicted RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 TNFRSF4P43489 277 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 STK19P49842 368 aaPredicted RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 DYNLT1P63172 113 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 PPP2R5EQ16537 467 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 FAM182AQ5T1J6 154 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 TMCO3Q6UWJ1 677 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 ZNF783Q6ZMS7 281 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 RFX6Q8HWS3 928 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 UBL4BQ8N7F7 174 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 ZNF557Q8N988 423 aaPredicted RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 WFIKKN2Q8TEU8 576 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 RBM41Q96IZ5 413 aaKnown RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 ZC3H10Q96K80 434 aaKnown RBP17.06■□□□□ 0.32
UBC-208ENST00000540700 CIPCQ9C0C6 399 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 VPS28Q9UK41 221 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.06■□□□□ 0.32
UBC-208ENST00000540700 CHD5Q8TDI0 1954 aa17.06■□□□□ 0.32
UBC-208ENST00000540700 NYNRINQ9P2P1 1898 aaKnown RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 CCDC163A0A0D9SF12 145 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 ADAM23O75077 832 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 PTPN7P35236 360 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 TIE1P35590 1138 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 IL12RB1P42701 662 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 PAPOLAP51003 745 aaKnown RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 NDST2P52849 883 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 GNG11P61952 73 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 SLC12A1Q13621 1099 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 POLD3Q15054 466 aaPredicted RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 TFDP3Q5H9I0 405 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 LINGO4Q6UY18 593 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 LEKR1Q6ZMV7 388 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 CCDC50Q8IVM0 306 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 CCDC117Q8IWD4 279 aaPredicted RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 DCAF4L2Q8NA75 395 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 KDF1Q8NAX2 398 aaPredicted RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 USP33Q8TEY7 942 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 RPL10LQ96L21 214 aaKnown RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 SPON2Q9BUD6 331 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 OSBPL8Q9BZF1 889 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 DUSP15Q9H1R2 295 aaPredicted RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 MAGEH1Q9H213 219 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 PDFQ9HBH1 243 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 ATP13A1Q9HD20 1204 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 DTLQ9NZJ0 730 aa17.05■□□□□ 0.32
UBC-208ENST00000540700 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
UBC-208ENST00000540700 WASH3PC4AMC7 463 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 J3KR12 359 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 K7ERQ8 282 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 KCNK3O14649 394 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 APOL1O14791 398 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 CST8O60676 142 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 HNRNPLP14866 589 aaKnown RBP eCLIP17.04■□□□□ 0.32
UBC-208ENST00000540700 POLR2EP19388 210 aaKnown RBP17.04■□□□□ 0.32
UBC-208ENST00000540700 CXCR5P32302 372 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 YBEYP58557 167 aaPredicted RBP17.04■□□□□ 0.32
UBC-208ENST00000540700 COPS2P61201 443 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 SERINC3Q13530 473 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 DMC1Q14565 340 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 ZNF234Q14588 700 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 EIF4HQ15056 248 aaKnown RBP17.04■□□□□ 0.32
UBC-208ENST00000540700 ELF2Q15723 593 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 C2orf27AQ580R0 203 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 B4GALNT4Q76KP1 1039 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 ALLCQ8N6M5 410 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 IL17RCQ8NAC3 791 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 RPLP0P6Q8NHW5 317 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 HAUS1Q96CS2 278 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 TRIM44Q96DX7 344 aaPredicted RBP17.04■□□□□ 0.32
UBC-208ENST00000540700 MTG2Q9H4K7 406 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 CACNA2D2Q9NY47 1150 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 THAP10Q9P2Z0 257 aaPredicted RBP17.04■□□□□ 0.32
UBC-208ENST00000540700 SLCO3A1Q9UIG8 710 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 ERVW-1Q9UQF0 538 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 INVSQ9Y283 1065 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 JRKLQ9Y4A0 524 aa17.04■□□□□ 0.32
UBC-208ENST00000540700 DFFAO00273 331 aa17.03■□□□□ 0.32
UBC-208ENST00000540700 SMAD6O43541 496 aaKnown RBP17.03■□□□□ 0.32
UBC-208ENST00000540700 KDELR3O43731 214 aa17.03■□□□□ 0.32
UBC-208ENST00000540700 RHOBTB1O94844 696 aa17.03■□□□□ 0.32
UBC-208ENST00000540700 PEX11BO96011 259 aa17.03■□□□□ 0.32
UBC-208ENST00000540700 DLDP09622 509 aaKnown RBP17.03■□□□□ 0.32
UBC-208ENST00000540700 HLA-EP13747 358 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms