RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 R4GN57 208 aa10.84□□□□□ -0.67
ATL3-204ENST00000540699 EML5Q05BV3 1969 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TBC1D3BA6NDS4 549 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 MCF2LO15068 1137 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 NPC1O15118 1278 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TP73O15350 636 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CREB3O43889 395 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 RNF40O75150 1001 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ERLIN1O75477 346 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CNTN5O94779 1100 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 SEC31AO94979 1220 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 PAPSS2O95340 614 aaPredicted RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 GAS8O95995 478 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 LMNAP02545 664 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 SP9P0CG40 484 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 RBP3P10745 1247 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 PABPC1P11940 636 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 RHOQP17081 205 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CD70P32970 193 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 RPL21P46778 160 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 NR2C2P49116 596 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 GDF10P55107 478 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 OXCT1P55809 520 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 EIF3EP60228 445 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 GBE1Q04446 702 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 LMAN2Q12907 356 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 XRCC4Q13426 336 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 SLC12A1Q13621 1099 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CDH18Q13634 790 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ENPP2Q13822 863 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 DMC1Q14565 340 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 HSF5Q4G112 596 aaPredicted RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 ALFQ53S48 1182 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 FSCBQ5H9T9 825 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TMEM215Q68D42 235 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 Q6ZS52 159 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ADIPOR2Q86V24 386 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 NLRP14Q86W24 1093 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CIR1Q86X95 450 aaPredicted RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 AHI1Q8N157 1196 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 SPEM1Q8N4L4 309 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 GLIS1Q8NBF1 620 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.83□□□□□ -0.68
ATL3-204ENST00000540699 P3H4Q92791 437 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TTC17Q96AE7 1141 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TBC1D31Q96DN5 1066 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 RTP4Q96DX8 246 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ALG14Q96F25 216 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 CCDC114Q96M63 670 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 EPAS1Q99814 870 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ZYG11BQ9C0D3 744 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 DPH5Q9H2P9 285 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ZDHHC18Q9NUE0 388 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ABCB8Q9NUT2 735 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 TMEM248Q9NWD8 314 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 DTLQ9NZJ0 730 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 KIAA1522Q9P206 1035 aaPredicted RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 GGA2Q9UJY4 613 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 INTS6Q9UL03 887 aaKnown RBP10.83□□□□□ -0.68
ATL3-204ENST00000540699 NFU1Q9UMS0 254 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 ZNF148Q9UQR1 794 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 SNX24Q9Y343 169 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 OR51B4Q9Y5P0 310 aa10.83□□□□□ -0.68
ATL3-204ENST00000540699 PLXND1Q9Y4D7 1925 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 BCLAF3A2AJT9 711 aaKnown RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 ANTXRLA6NF34 631 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 WASH4PA8MWX3 477 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 H0Y626 953 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 TIMM44O43615 452 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 MFSD11O43934 449 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 KRT14P02533 472 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 HNRNPLP14866 589 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATL3-204ENST00000540699 ERCC2P18074 760 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 TPI1P60174 286 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 MTAPQ13126 283 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 ZNF177Q13360 481 aaPredicted RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 E2F5Q15329 346 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 PPP1R7Q15435 360 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 FUT11Q495W5 492 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 MAP9Q49MG5 647 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 PKN3Q6P5Z2 889 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 EMBQ6PCB8 327 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 ZC3H14Q6PJT7 736 aaKnown RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 TMCO3Q6UWJ1 677 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 ZNF783Q6ZMS7 281 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 SETD3Q86TU7 594 aaPredicted RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 MAML2Q8IZL2 1156 aaPredicted RBP10.82□□□□□ -0.68
ATL3-204ENST00000540699 CARNMT1Q8N4J0 409 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 OR52K2Q8NGK3 314 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 IFT81Q8WYA0 676 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 ART4Q93070 314 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 CAVIN3Q969G5 261 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 QKIQ96PU8 341 aaKnown RBP eCLIP10.82□□□□□ -0.68
ATL3-204ENST00000540699 TMEM121Q9BTD3 319 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 FAM129AQ9BZQ8 928 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 TRIM31Q9BZY9 425 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 C10orf88Q9H8K7 445 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 USP29Q9HBJ7 922 aa10.82□□□□□ -0.68
ATL3-204ENST00000540699 PCDH9Q9HC56 1237 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms