RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 FOXN3O00409 490 aaPredicted RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 RIOK3O14730 519 aaKnown RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 SMAD6O43541 496 aaKnown RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 GP1BAP07359 652 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 GIMD1P0DJR0 217 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 RRM1P23921 792 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 OR1E1P30953 314 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 GABRB2P47870 512 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 SULT1E1P49888 294 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 DEUP1Q05D60 604 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 C19orf57Q0VDD7 668 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 SLC25A52Q3SY17 297 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 TMEM259Q4ZIN3 620 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 CDCP2Q5VXM1 449 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 KIAA1161Q6NSJ0 714 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 RETSATQ6NUM9 610 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 GCNT7Q6ZNI0 430 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 SLC47A2Q86VL8 602 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 ERICH1Q86X53 443 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 IRF2BP1Q8IU81 584 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 FAM71AQ8IYT1 594 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 PCDH20Q8N6Y1 951 aaKnown RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 FAM181AQ8N9Y4 354 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 OR13H1Q8NG92 308 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 SLC39A7Q92504 469 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 FCRL3Q96P31 734 aaPredicted RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 HAPLN3Q96S86 360 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 DUSP23Q9BVJ7 150 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 CALN1Q9BXU9 219 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 GPR27Q9NS67 375 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 UCKL1Q9NWZ5 548 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 NLGN3Q9NZ94 848 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 KIAA1468Q9P260 1216 aa12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 ZFR2Q9UPR6 939 aaKnown RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 ARID1BQ8NFD5 2236 aaPredicted RBP12.27□□□□□ -0.45
CBX3P4-202ENST00000540428 TEX51A0A1B0GUA7 166 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 SCAMP1O15126 338 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 AP1G1O43747 822 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 GADD45BO75293 160 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF821O75541 412 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 LEFTY1O75610 366 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 DXOO77932 396 aaKnown RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 PCDH8O95206 1070 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 TFE3P19532 575 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ITGB7P26010 798 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 MTIF2P46199 727 aaKnown RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 SERPINH1P50454 418 aaKnown RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 DUSP3P51452 185 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 NEK3P51956 506 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 HNRNPKP61978 463 aaKnown RBP eCLIP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 RPS21P63220 83 aaKnown RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 TLE3Q04726 772 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ARSIQ5FYB1 569 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 LINGO4Q6UY18 593 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 KYAT3Q6YP21 454 aaKnown RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 KDM7AQ6ZMT4 941 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 DPY19L3Q6ZPD9 716 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ARCQ7LC44 396 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 GPR155Q7Z3F1 870 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 BNIPLQ7Z465 357 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 TFAP2DQ7Z6R9 452 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 LSMEM2Q8N112 164 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 SLC22A18ASQ8N1D0 253 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 CHST14Q8NCH0 376 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 GRIN3AQ8TCU5 1115 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 KLK6Q92876 244 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 C18orf8Q96DM3 657 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 FEM1CQ96JP0 617 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF578Q96N58 590 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 DEPDC7Q96QD5 511 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 TBCBQ99426 244 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 MYOCQ99972 504 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 PDCL3Q9H2J4 239 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 FZD3Q9NPG1 666 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 MPP6Q9NZW5 540 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 ZNF212Q9UDV6 495 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 AJAP1Q9UKB5 411 aaPredicted RBP12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 RAI2Q9Y5P3 530 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 WASF2Q9Y6W5 498 aa12.26□□□□□ -0.45
CBX3P4-202ENST00000540428 H3BM21 787 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 RNF103O00237 685 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 FFAR2O15552 330 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 LZTS3O60299 673 aaPredicted RBP12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 OPA1O60313 960 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ZMPSTE24O75844 475 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ADRB3P13945 408 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 CYP11B1P15538 503 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 L1CAMP32004 1257 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 CLDN2P57739 230 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 RNASE9P60153 205 aaKnown RBP12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 MAN2A1Q16706 1144 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 ARTNQ5T4W7 220 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 FAM102AQ5T9C2 384 aaPredicted RBP12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 SEL1L3Q68CR1 1132 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 Q6ZSR6 202 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 XYLT1Q86Y38 959 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 FAM114A1Q8IWE2 563 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 SPACA3Q8IXA5 215 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 PLPP6Q8IY26 295 aa12.25□□□□□ -0.45
CBX3P4-202ENST00000540428 MLKLQ8NB16 471 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms