RNA–Protein interactions for RNA: ENST00000540113.5

C11orf54-214, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-214ENST00000540113 CHRNA4P43681 627 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 HARS2P49590 506 aaKnown RBP11.71□□□□□ -0.54
C11orf54-214ENST00000540113 CUL3Q13618 768 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 LRRC36Q1X8D7 754 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 CCDC153Q494R4 210 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 CFAP157Q5JU67 520 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 CCSAPQ6IQ19 270 aaPredicted RBP11.71□□□□□ -0.54
C11orf54-214ENST00000540113 FRMD7Q6ZUT3 714 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 NET1Q7Z628 596 aaPredicted RBP11.71□□□□□ -0.54
C11orf54-214ENST00000540113 DPF3Q92784 378 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 SCYL1Q96KG9 808 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 ADAM2Q99965 735 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 ACBD6Q9BR61 282 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 FICDQ9BVA6 458 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 GATA5Q9BWX5 397 aaPredicted RBP11.71□□□□□ -0.54
C11orf54-214ENST00000540113 BATF3Q9NR55 127 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 NEU3Q9UQ49 428 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 THSD7BQ9C0I4 1608 aa11.71□□□□□ -0.54
C11orf54-214ENST00000540113 A0A0U1RQF3 1178 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 M0QZQ0 153 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 NCAM2O15394 837 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 PMPCBO75439 489 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 VAPBO95292 243 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 AHSGP02765 367 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SBK3P0C264 359 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ACADSP16219 412 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 PRKCZQ05513 592 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CDK18Q07002 472 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 USP10Q14694 798 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TRIM71Q2Q1W2 868 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TCHHL1Q5QJ38 904 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ITPRIPL1Q6GPH6 555 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ESRP1Q6NXG1 681 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CLEC14AQ86T13 490 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 MFSD6LQ8IWD5 586 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TDRD5Q8NAT2 981 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 KLHDC9Q8NEP7 349 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 RSPH1Q8WYR4 309 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SGF29Q96ES7 293 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 MARK4Q96L34 752 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 OMDQ99983 421 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SLC39A8Q9C0K1 460 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CDH19Q9H159 772 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SPC25Q9HBM1 224 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 DNAJC28Q9NX36 388 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 RUVBL2Q9Y230 463 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 MAP3K13O43283 966 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 PAGE1O75459 146 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 F9P00740 461 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SERPINB6P35237 376 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 SERPINB5P36952 375 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 NPY2RP49146 381 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 RAB27AP51159 221 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 COPAP53621 1224 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 FCGRTP55899 365 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ACTR3P61158 418 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CDH17Q12864 832 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 GRIK3Q13003 919 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 PCSK7Q16549 785 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 DNAL1Q4LDG9 190 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ARTNQ5T4W7 220 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 MYLK4Q86YV6 388 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CEP97Q8IW35 865 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ARHGAP12Q8IWW6 846 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 OR6Y1Q8NGX8 325 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 IRGQQ8WZA9 623 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 CASP10Q92851 521 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 IL22Q9GZX6 179 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 DMAP1Q9NPF5 467 aaPredicted RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TRMT13Q9NUP7 481 aaKnown RBP11.7□□□□□ -0.54
C11orf54-214ENST00000540113 RRN3Q9NYV6 651 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 ADAM28Q9UKQ2 775 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 TRHDEQ9UKU6 1024 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 PCDHB12Q9Y5F1 795 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 RAD54BQ9Y620 910 aa11.7□□□□□ -0.54
C11orf54-214ENST00000540113 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 AURKAO14965 403 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 TRIM13O60858 407 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 KLHL2O95198 593 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 LUC7L3O95232 432 aaKnown RBP11.69□□□□□ -0.54
C11orf54-214ENST00000540113 IGLV3-25P01717 112 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 MPOP05164 745 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 JUNP05412 331 aaKnown RBP11.69□□□□□ -0.54
C11orf54-214ENST00000540113 LINGO3P0C6S8 592 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 EPHA3P29320 983 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 TUSC3Q13454 348 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 PRPSAP1Q14558 356 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 PPM1LQ5SGD2 360 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 CAPRIN2Q6IMN6 1127 aaKnown RBP11.69□□□□□ -0.54
C11orf54-214ENST00000540113 TMEM154Q6P9G4 183 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 DCLRE1AQ6PJP8 1040 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 C14orf80Q86SX3 495 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 ZNF598Q86UK7 904 aaKnown RBP11.69□□□□□ -0.54
C11orf54-214ENST00000540113 ZC3HC1Q86WB0 502 aaKnown RBP11.69□□□□□ -0.54
C11orf54-214ENST00000540113 METTL23Q86XA0 190 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 HPS6Q86YV9 775 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 LMNTD2Q8IXW0 634 aa11.69□□□□□ -0.54
C11orf54-214ENST00000540113 REM2Q8IYK8 340 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms