RNA–Protein interactions for RNA: ENST00000540109.5

PTPRD-214, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 6,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-214ENST00000540109 COILP38432 576 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SEPHS1P49903 392 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 AQP5P55064 265 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 RAD51Q06609 339 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FAM47CQ5HY64 1035 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TDRD10Q5VZ19 366 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 DARS2Q6PI48 645 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 KLHDC10Q6PID8 442 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ARCQ7LC44 396 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 BBS7Q8IWZ6 715 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 EFCAB3Q8N7B9 438 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 RNF148Q8N7C7 305 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 RTL3Q8N8U3 475 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM143Q96AN5 459 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 E2F7Q96AV8 911 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TSPAN17Q96FV3 270 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FAM111AQ96PZ2 611 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ASB2Q96Q27 587 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MTG1Q9BT17 334 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF717Q9BY31 904 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TMEM245Q9H330 911 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 OSGEPQ9NPF4 335 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 KLHL3Q9UH77 587 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ANAPC7Q9UJX3 599 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZSWIM8A7E2V4 1837 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 LCTP09848 1927 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MSCO60682 206 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 GLRA3O75311 464 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FAM163BP0C2L3 166 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TXNP10599 105 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ACO1P21399 889 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 STIP1P31948 543 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 GSSP48637 474 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 NOMO3P69849 1222 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PTK6Q13882 451 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 CCNG2Q16589 344 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF699Q32M78 642 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PGS1Q32NB8 556 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF667Q5HYK9 610 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SLC47A2Q86VL8 602 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 DDIASQ8IXT1 998 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PLEKHA8Q96JA3 519 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PCDHB18PQ96TA0 734 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 VPS51Q9UID3 782 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 VPS4AQ9UN37 437 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 AGAP1Q9UPQ3 857 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 WDR81Q562E7 1941 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PSMB9P28065 219 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ITGA8P53708 1063 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 C2CD6Q53TS8 623 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TWF2Q6IBS0 349 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 DNAJC24Q6P3W2 148 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SLC2A7Q6PXP3 512 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TMC3Q7Z5M5 1100 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PARP8Q8N3A8 854 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZSCAN18Q8TBC5 510 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FBXO25Q8TCJ0 367 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TADA1Q96BN2 335 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TARS2Q9BW92 718 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PIGUQ9H490 435 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 DENND2DQ9H6A0 471 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PRKAG3Q9UGI9 489 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FETUBQ9UGM5 382 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 COG5Q9UP83 839 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SBF1O95248 1867 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 E2F8A0AVK6 867 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SORBS3O60504 671 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PORP16435 677 aaPredicted RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 CNTN2Q02246 1040 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SP4Q02446 784 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF568Q3ZCX4 644 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 KHDC1Q4VXA5 237 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MAMDC4Q6UXC1 1216 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 CCDC28AQ8IWP9 274 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 FEZF2Q8TBJ5 459 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 VPS33AQ96AX1 596 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MRPL48Q96GC5 212 aaKnown RBP6.14□□□□□ -1.43
PTPRD-214ENST00000540109 BDH2Q9BUT1 245 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 EBF3Q9H4W6 596 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 POLR1BQ9H9Y6 1135 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 SIN3BO75182 1162 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TPBGLP0DKB5 382 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 CCNA2P20248 432 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ITGAXP20702 1163 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MMP13P45452 471 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 BCAP31P51572 246 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 BROXQ5VW32 411 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PPP2R2DQ66LE6 453 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF544Q6NX49 715 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 TXNDC11Q6PKC3 985 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ZNF333Q96JL9 665 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 BIRC8Q96P09 236 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PCYT2Q99447 389 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 CD320Q9NPF0 282 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 ING3Q9NXR8 418 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 PACSIN3Q9UKS6 424 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 MAPRE3Q9UPY8 281 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 AP4B1Q9Y6B7 739 aa6.14□□□□□ -1.43
PTPRD-214ENST00000540109 A0A0J9YVX5 310 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms