RNA–Protein interactions for RNA: ENST00000540017.6

SNRPA1-203, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 1 (best)

Gene SNRPA1, Length 506 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-203ENST00000540017 OMDQ99983 421 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 CEP44Q9C0F1 390 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 SLC39A8Q9C0K1 460 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 NCKAP1Q9Y2A7 1128 aa18.66■□□□□ 0.58
SNRPA1-203ENST00000540017 CXorf51AA0A1B0GTR3 108 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 LOC105378220A0A1B0GUY1 285 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 DAPK3O43293 454 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 CHRNA3P32297 505 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 PARP15Q460N3 678 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 AFMIDQ63HM1 303 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 DSG4Q86SJ6 1040 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 ZNF354CQ86Y25 554 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 ARHGAP12Q8IWW6 846 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 TP53INP2Q8IXH6 220 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 PCDH20Q8N6Y1 951 aaKnown RBP18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 C12orf50Q8NA57 414 aaPredicted RBP18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 DNASE2BQ8WZ79 361 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 FAM131CQ96AQ9 280 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 VOPP1Q96AW1 172 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 TM6SF2Q9BZW4 377 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 SGK2Q9HBY8 427 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 PCDH18Q9HCL0 1135 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 FSCN3Q9NQT6 498 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 ETNK2Q9NVF9 386 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 FZD4Q9ULV1 537 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 HPCAL4Q9UM19 191 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 SLCO1B1Q9Y6L6 691 aa18.65■□□□□ 0.58
SNRPA1-203ENST00000540017 LNP1A1A4G5 178 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 TMEM110-MUSTN1A8MSY1 372 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 MEI4A8MW99 385 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 C10orf142B7Z368 130 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 J3KR12 359 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 BUB1O43683 1085 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 CD48P09326 243 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 FECHP22830 423 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 AMPD1P23109 780 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 SSR1P43307 286 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 DNA2P51530 1060 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 ARSEP51690 589 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 NDST2P52849 883 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 CNTN1Q12860 1018 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 RSPO4Q2I0M5 234 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 AASDHQ4L235 1098 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 TRIM61Q5EBN2 209 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 CARD16Q5EG05 197 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 ARSIQ5FYB1 569 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 SYCP2LQ5T4T6 812 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 NCEH1Q6PIU2 408 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 RGL4Q8IZJ4 473 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 TSC1Q92574 1164 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 ISG20Q96AZ6 181 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 BIRC7Q96CA5 298 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 CSPG4P5Q96PW8 444 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 PANX2Q96RD6 677 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 PCED1AQ9H1Q7 454 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 EVLQ9UI08 416 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 EIF2B4Q9UI10 523 aaKnown RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 TFR2Q9UP52 801 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 ZBTB32Q9Y2Y4 487 aaPredicted RBP18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 WASF2Q9Y6W5 498 aa18.64■□□□□ 0.57
SNRPA1-203ENST00000540017 FAM47DPA6NHR8 397 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 H3BRJ5 948 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 KHNYNO15037 678 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 MTA2O94776 668 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 TMCC1O94876 653 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 LCA5LO95447 670 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 IGHV4-34P06331 123 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 IL4RP24394 825 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 GKP32189 559 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 HOXD12P35452 270 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 GJC1P36383 396 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 PAPOLAP51003 745 aaKnown RBP18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 ZNF135P52742 658 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 ADPRHP54922 357 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 MMRN1Q13201 1228 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 MESDQ14696 234 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 WDR45BQ5MNZ6 344 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 AGBL4Q5VU57 503 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 FAM46CQ5VWP2 391 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 SLC23A3Q6PIS1 610 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 ARHGAP36Q6ZRI8 547 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 TMIEQ8NEW7 156 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 C1orf216Q8TAB5 229 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 FAM71BQ8TC56 605 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 GRIN3AQ8TCU5 1115 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 ARRDC3Q96B67 414 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 CCDC114Q96M63 670 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 PDFQ9HBH1 243 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 IL36AQ9UHA7 158 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 INTUQ9ULD6 942 aa18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 FARP1Q9Y4F1 1045 aaPredicted RBP18.63■□□□□ 0.57
SNRPA1-203ENST00000540017 ZSCAN5CA6NGD5 496 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 SOWAHDA6NJG2 315 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 PRR5-ARHGAP8B1AHC4 643 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 C1QTNF3-AMACRE9PGA6 284 aa18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 KPNA3O00505 521 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 FOXD2O60548 495 aaPredicted RBP18.62■□□□□ 0.57
SNRPA1-203ENST00000540017 LEFTY1O75610 366 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms