RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PPP6R2O75170 966 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 RPS6KA4O75676 772 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 AMHP03971 560 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 CCDC159P0C7I6 412 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 TFEBP19484 476 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 PPP2R1AP30153 589 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 CRKLP46109 303 aaKnown RBP6.32□□□□□ -1.4
MRE11-209ENST00000540013 ALDH1A3P47895 512 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 LMAN1P49257 510 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 SCNN1GP51170 649 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 HSD17B4P51659 736 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 CTXN1P60606 82 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 C17orf67Q0P5P2 114 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 RABEP1Q15276 862 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 NFIL3Q16649 462 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 LIPMQ5VYY2 423 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 ADALQ6DHV7 355 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 KRT80Q6KB66 452 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 RINT1Q6NUQ1 792 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 DBX2Q6ZNG2 339 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 SEM1Q6ZVN7 128 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 PPP1R42Q7Z4L9 355 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 ADGRF2Q8IZF7 708 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 FRMD1Q8N878 549 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 POGLUT1Q8NBL1 392 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 IPMKQ8NFU5 416 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 NLGN4YQ8NFZ3 816 aaPredicted RBP6.32□□□□□ -1.4
MRE11-209ENST00000540013 NCSTNQ92542 709 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 RMDN1Q96DB5 314 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 PPP1R13BQ96KQ4 1090 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 AK8Q96MA6 479 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 DACH2Q96NX9 599 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 NR1H4Q96RI1 486 aaPredicted RBP6.32□□□□□ -1.4
MRE11-209ENST00000540013 NDC1Q9BTX1 674 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 PHF7Q9BWX1 381 aaPredicted RBP6.32□□□□□ -1.4
MRE11-209ENST00000540013 TEX12Q9BXU0 123 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 CPEB1Q9BZB8 566 aaKnown RBP6.32□□□□□ -1.4
MRE11-209ENST00000540013 KCNH6Q9H252 994 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 LDAHQ9H6V9 325 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 IL21RQ9HBE5 538 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 NUDCQ9Y266 331 aa6.32□□□□□ -1.4
MRE11-209ENST00000540013 N4BP2Q86UW6 1770 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 KCPQ6ZWJ8 1503 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 BRCA1P38398 1863 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 KRT87PA6NCN2 255 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 OR2W5A6NFC9 320 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 FAM90A20PA6NIJ5 464 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 LIPT2A6NK58 231 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 A8MV72 311 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 RAB27BO00194 218 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 WDR46O15213 610 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 HNRNPRO43390 633 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 STX6O43752 255 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 PRPSAP2O60256 369 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 KINO60870 393 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 COQ9O75208 318 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 TULP3O75386 442 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 PEX11BO96011 259 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 POMCP01189 267 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 CD1AP06126 327 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 MMP10P09238 476 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 DLDP09622 509 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 SPATA31D3P0C874 917 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 PRKAR2BP31323 418 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 RFC4P35249 363 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 ARL1P40616 181 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 CAPZA2P47755 286 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SLC11A2P49281 568 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SLC39A6Q13433 755 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 TMED1Q13445 227 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 NFE2L1Q14494 772 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 NTRK2Q16620 822 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 ZXDCQ2QGD7 858 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 GALNTL6Q49A17 601 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 ZNF805Q5CZA5 627 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 C1QL3Q5VWW1 255 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 IRGCQ6NXR0 463 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SPATA31D4Q6ZUB0 917 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 CHST3Q7LGC8 479 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 DPP10Q8N608 796 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SLC15A4Q8N697 577 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 ANKRD20A12PQ8NF67 263 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 GABPB2Q8TAK5 448 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 BICD2Q8TD16 824 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SIPA1Q96FS4 1042 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 MED15Q96RN5 788 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 C1orf21Q9H246 121 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 MMADHCQ9H3L0 296 aaPredicted RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 THAP9Q9H5L6 903 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 OPA3Q9H6K4 179 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 LIN28AQ9H9Z2 209 aaKnown RBP6.31□□□□□ -1.4
MRE11-209ENST00000540013 MID1IP1Q9NPA3 183 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 SNX15Q9NRS6 342 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 MCM9Q9NXL9 1143 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 KCTD5Q9NXV2 234 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 DNAJB9Q9UBS3 223 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 FBXL5Q9UKA1 691 aa6.31□□□□□ -1.4
MRE11-209ENST00000540013 AFDNP55196 1824 aaKnown RBP6.3□□□□□ -1.4
MRE11-209ENST00000540013 TNFSF14O43557 240 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms