RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 FATE1Q969F0 183 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 QKIQ96PU8 341 aaKnown RBP eCLIP15.72■□□□□ 0.11
DDB1-216ENST00000539739 AP1M1Q9BXS5 423 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 FOXQ1Q9C009 403 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 PDFQ9HBH1 243 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 HAUS2Q9NVX0 235 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 SMARCAL1Q9NZC9 954 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 RSPH14Q9UHP6 348 aa15.72■□□□□ 0.11
DDB1-216ENST00000539739 LIASO43766 372 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 RNF40O75150 1001 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 MT-CO1P00395 513 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 CHRNB1P11230 501 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 SRCP12931 536 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 STK19P49842 368 aaPredicted RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 BYSLQ13895 437 aaKnown RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 PRKD1Q15139 912 aaPredicted RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 PTPRNQ16849 979 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 C2orf27AQ580R0 203 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 EMC10Q5UCC4 262 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 MARC1Q5VT66 337 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 HEATR6Q6AI08 1181 aaKnown RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 SERPINA13PQ6UXR4 307 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 CHPFQ8IZ52 775 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 FLCNQ8NFG4 579 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 SLC35B2Q8TB61 432 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 USP33Q8TEY7 942 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 LRRN4Q8WUT4 740 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 ATG4AQ8WYN0 398 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 MRGPRX3Q96LB0 322 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 RBM12Q9NTZ6 932 aaKnown RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 SEPT10Q9P0V9 454 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 SLCO3A1Q9UIG8 710 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 DNPEPQ9ULA0 475 aa15.71■□□□□ 0.11
DDB1-216ENST00000539739 MTF2Q9Y483 593 aaPredicted RBP15.71■□□□□ 0.11
DDB1-216ENST00000539739 TTC28Q96AY4 2481 aa15.71■□□□□ 0.1
DDB1-216ENST00000539739 BCLAF3A2AJT9 711 aaKnown RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 CFAP69A5D8W1 941 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 ATP9BO43861 1147 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 CCNB1P14635 433 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 NTSR1P30989 418 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 CKAP4Q07065 602 aaKnown RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 SNX1Q13596 522 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 ZNF235Q14590 738 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 LBRQ14739 615 aaKnown RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 DLG2Q15700 870 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 DRICH1Q6PGQ1 229 aaPredicted RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 B4GALNT4Q76KP1 1039 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 CCDC91Q7Z6B0 441 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 ZNF687Q8N1G0 1237 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 PJA1Q8NG27 643 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 HTR3CQ8WXA8 447 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 MAGOHBQ96A72 148 aaKnown RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 CINPQ9BW66 212 aaPredicted RBP15.7■□□□□ 0.1
DDB1-216ENST00000539739 CEP44Q9C0F1 390 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 SEPT3Q9UH03 358 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 SUN2Q9UH99 717 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 ZNF148Q9UQR1 794 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 SIT1Q9Y3P8 196 aa15.7■□□□□ 0.1
DDB1-216ENST00000539739 KCNK1O00180 336 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 STK10O94804 968 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 TMCC1O94876 653 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 CD160O95971 181 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 RBL1P28749 1068 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 STIP1P31948 543 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 WHAMMP3Q1A5X7 153 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 PCDH20Q8N6Y1 951 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 PRELID2Q8N945 189 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 RPLP0P6Q8NHW5 317 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 MAML1Q92585 1016 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 NKD2Q969F2 451 aaPredicted RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 ISG20Q96AZ6 181 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 CACNA2D2Q9NY47 1150 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 AMACRQ9UHK6 382 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 HCN2Q9UL51 889 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 DRG1Q9Y295 367 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 FCF1Q9Y324 198 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 ACTL7AQ9Y615 435 aa15.69■□□□□ 0.1
DDB1-216ENST00000539739 NYNRINQ9P2P1 1898 aaKnown RBP15.69■□□□□ 0.1
DDB1-216ENST00000539739 TMEM221A6NGB7 291 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 TTC34A8MYJ7 566 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 K7ERQ8 282 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 M0R296 226 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 KCNN4O15554 427 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 SMAD6O43541 496 aaKnown RBP15.68■□□□□ 0.1
DDB1-216ENST00000539739 ATG13O75143 517 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 KLF8O95600 359 aaPredicted RBP15.68■□□□□ 0.1
DDB1-216ENST00000539739 PEX11BO96011 259 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 JCHAINP01591 159 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 VAV1P15498 845 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 IL12RB1P42701 662 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 MMP13P45452 471 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 RECQLP46063 649 aaPredicted RBP15.68■□□□□ 0.1
DDB1-216ENST00000539739 IFI35P80217 286 aaPredicted RBP15.68■□□□□ 0.1
DDB1-216ENST00000539739 LMNB2Q03252 620 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 SLC10A7Q0GE19 358 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 CYTH1Q15438 398 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 C22orf39Q6P5X5 142 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 ALLCQ8N6M5 410 aa15.68■□□□□ 0.1
DDB1-216ENST00000539739 C12orf50Q8NA57 414 aaPredicted RBP15.68■□□□□ 0.1
DDB1-216ENST00000539739 IL17RCQ8NAC3 791 aa15.68■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms