RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 FGF14Q92915 247 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 ZNF419Q96HQ0 510 aaPredicted RBP16.46■□□□□ 0.22
TRAF3-204ENST00000539721 FAM83CQ9BQN1 747 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 C2orf49Q9BVC5 232 aaPredicted RBP16.46■□□□□ 0.22
TRAF3-204ENST00000539721 GLOD4Q9HC38 313 aa16.46■□□□□ 0.22
TRAF3-204ENST00000539721 HOXC11O43248 304 aaPredicted RBP16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ECI2O75521 394 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 TMEM63AO94886 807 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 PSMC3P17980 439 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 TPSB2P20231 275 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 HLA-FP30511 346 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 MAGEA6P43360 314 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ARF5P84085 180 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ITKQ08881 620 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 SMAD4Q13485 552 aaKnown RBP16.45■□□□□ 0.22
TRAF3-204ENST00000539721 PRPSAP1Q14558 356 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 TPSAB1Q15661 275 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 CCDC25Q86WR0 208 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ZCCHC9Q8N567 271 aaKnown RBP16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP16.45■□□□□ 0.22
TRAF3-204ENST00000539721 CAVIN3Q969G5 261 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 GUCD1Q96NT3 240 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 XPO6Q96QU8 1125 aaKnown RBP16.45■□□□□ 0.22
TRAF3-204ENST00000539721 SLC2A11Q9BYW1 496 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 EPS15L1Q9UBC2 864 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 VPS51Q9UID3 782 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 GGA2Q9UJY4 613 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ATP8A1Q9Y2Q0 1164 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ACTL7AQ9Y615 435 aa16.45■□□□□ 0.22
TRAF3-204ENST00000539721 ZMPSTE24O75844 475 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 PLK1P53350 603 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 TNK2Q07912 1038 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 RFTN1Q14699 578 aaPredicted RBP16.44■□□□□ 0.22
TRAF3-204ENST00000539721 PITRM1Q5JRX3 1037 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 ASTLQ6HA08 431 aaPredicted RBP16.44■□□□□ 0.22
TRAF3-204ENST00000539721 LINGO4Q6UY18 593 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 DEFB123Q8N688 67 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 PDCD7Q8N8D1 485 aaKnown RBP16.44■□□□□ 0.22
TRAF3-204ENST00000539721 ACDQ96AP0 544 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 LMLNQ96KR4 655 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 PWWP2AQ96N64 755 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 GORASP1Q9BQQ3 440 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 CINPQ9BW66 212 aaPredicted RBP16.44■□□□□ 0.22
TRAF3-204ENST00000539721 FOXP3Q9BZS1 431 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 ECT2Q9H8V3 914 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 HAUS2Q9NVX0 235 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 SEPT3Q9UH03 358 aa16.44■□□□□ 0.22
TRAF3-204ENST00000539721 GOLGA6CA6NDK9 693 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 GOLGA6BA6NDN3 693 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 MBTPS2O43462 519 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 CACNG3O60359 315 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 GOLGA6DP0CG33 693 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 PABPC1P11940 636 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 MAXP61244 160 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 RETSATQ6NUM9 610 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 PPP1R21Q6ZMI0 780 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 CPA6Q8N4T0 437 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 FCRL5Q96RD9 977 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 TSPYL1Q9H0U9 437 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 HPS4Q9NQG7 708 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 EIF2B3Q9NR50 452 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 DNAJC17Q9NVM6 304 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 GOLGA6AQ9NYA3 693 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 INTS6Q9UL03 887 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 GDI1P31150 447 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 ARL4CP56559 192 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 GEMIN4P57678 1058 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 DHX9Q08211 1270 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 NR1H3Q13133 447 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 FUT11Q495W5 492 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 PGBD5Q8N414 524 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 PPP1R2P1Q96PQ5 205 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 MLPHQ9BV36 600 aaPredicted RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 TRMT61BQ9BVS5 477 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 POLR1EQ9GZS1 481 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 SLC25A51Q9H1U9 297 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 AAR2Q9Y312 384 aaKnown RBP16.43■□□□□ 0.22
TRAF3-204ENST00000539721 NUMBLQ9Y6R0 609 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 COL4A3Q01955 1670 aa16.43■□□□□ 0.22
TRAF3-204ENST00000539721 MIA3Q5JRA6 1907 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 PSMD3O43242 534 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 ANXA9O76027 345 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 DGKGP49619 791 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 SARNPP82979 210 aaKnown RBP16.42■□□□□ 0.22
TRAF3-204ENST00000539721 CDK16Q00536 496 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 RUNX3Q13761 415 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 DMC1Q14565 340 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 SLMAPQ14BN4 828 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 CYTH1Q15438 398 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 HIF1AQ16665 826 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 CEP128Q6ZU80 1094 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 TMC3Q7Z5M5 1100 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 DDX51Q8N8A6 666 aaKnown RBP eCLIP16.42■□□□□ 0.22
TRAF3-204ENST00000539721 MCUQ8NE86 351 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 SPATA22Q8NHS9 363 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 OXNAD1Q96HP4 312 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-204ENST00000539721 RPP25Q9BUL9 199 aaKnown RBP16.42■□□□□ 0.22
TRAF3-204ENST00000539721 FRMD8Q9BZ67 464 aaPredicted RBP16.42■□□□□ 0.22
TRAF3-204ENST00000539721 UBP1Q9NZI7 540 aa16.42■□□□□ 0.22
TRAF3-204ENST00000539721 FBXO10Q9UK96 956 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms