RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TMCO3Q6UWJ1 677 aa16.05■□□□□ 0.16
RPAIN-206ENST00000539417 ARMCX6Q7L4S7 300 aa16.05■□□□□ 0.16
RPAIN-206ENST00000539417 OR6K2Q8NGY2 324 aa16.05■□□□□ 0.16
RPAIN-206ENST00000539417 RNF25Q96BH1 459 aaPredicted RBP16.05■□□□□ 0.16
RPAIN-206ENST00000539417 TOE1Q96GM8 510 aaKnown RBP16.05■□□□□ 0.16
RPAIN-206ENST00000539417 PABPC3Q9H361 631 aaKnown RBP16.05■□□□□ 0.16
RPAIN-206ENST00000539417 SEMA4AQ9H3S1 761 aa16.05■□□□□ 0.16
RPAIN-206ENST00000539417 SPAG17Q6Q759 2223 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 A0A1W2PP55 124 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 LRRD1A4D1F6 860 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 MCF2LO15068 1137 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 GFRA3O60609 400 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 PRAMEF11O60813 436 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 IL1BP01584 269 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 IGLV3-19P01714 112 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 KRT1P04264 644 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 SLC8A1P32418 973 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 DRD3P35462 400 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 SLC1A1P43005 524 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 DNA2P51530 1060 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 CLCN6P51797 869 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 SLC20A2Q08357 652 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 SLC10A2Q12908 348 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-206ENST00000539417 PDK2Q15119 407 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 ZFYVE27Q5T4F4 411 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 C11orf63Q6NUN7 778 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 SLC41A1Q8IVJ1 513 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 LRRC57Q8N9N7 239 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 LUC7LQ9NQ29 371 aaKnown RBP16.04■□□□□ 0.16
RPAIN-206ENST00000539417 WSB2Q9NYS7 404 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-206ENST00000539417 RCOR3Q9P2K3 495 aaPredicted RBP16.04■□□□□ 0.16
RPAIN-206ENST00000539417 PPM1HQ9ULR3 514 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 HPCAL4Q9UM19 191 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 CEP192Q8TEP8 1941 aa16.04■□□□□ 0.16
RPAIN-206ENST00000539417 TNRC6BQ9UPQ9 1833 aaKnown RBP16.04■□□□□ 0.16
RPAIN-206ENST00000539417 MACROD2A1Z1Q3 448 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 INSIG1O15503 277 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ZNF217O75362 1048 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 GJB3O75712 270 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PEX11BO96011 259 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 DNTTP04053 509 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ACADMP11310 421 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CD6P30203 668 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 RGRP47804 291 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 GBE1Q04446 702 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CARD16Q5EG05 197 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 LRRC38Q5VT99 294 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 MFSD7Q6UXD7 560 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 DAAM2Q86T65 1068 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 RHOT1Q8IXI2 618 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PIP4K2CQ8TBX8 421 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 GRIN3AQ8TCU5 1115 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 OR8D1Q8WZ84 308 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ARRDC3Q96B67 414 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 EXOC2Q96KP1 924 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 SPACA7Q96KW9 195 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 NSMCE3Q96MG7 304 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 RNF157Q96PX1 679 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ZNF670Q9BS34 389 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 GPR174Q9BXC1 333 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CEP44Q9C0F1 390 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 NEUROG2Q9H2A3 272 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 SMOC1Q9H4F8 434 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 FBRSQ9HAH7 460 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 LHX3Q9UBR4 397 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 WASF2Q9Y6W5 498 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 OTOGLQ3ZCN5 2332 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ARHGAP42A6NI28 874 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 MUSKO15146 869 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 MAP3K13O43283 966 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CHRNA3P32297 505 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CCNHP51946 323 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 NAP1L1P55209 391 aaKnown RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 RPL6Q02878 288 aaKnown RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ADCY2Q08462 1091 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PAFAH1B3Q15102 231 aaKnown RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ARSIQ5FYB1 569 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 NPNTQ6UXI9 565 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PCDH20Q8N6Y1 951 aaKnown RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PLD5Q8N7P1 536 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 ZNF419Q96HQ0 510 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 C6orf106Q9H6K1 298 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 PARD6AQ9NPB6 346 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 FBXL12Q9NXK8 326 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 UBA2Q9UBT2 640 aaPredicted RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 IPO11Q9UI26 975 aaKnown RBP16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CAPN6Q9Y6Q1 641 aa16.03■□□□□ 0.16
RPAIN-206ENST00000539417 CFAP54Q96N23 3096 aa16.02■□□□□ 0.16
RPAIN-206ENST00000539417 ATXN2Q99700 1313 aaKnown RBP16.02■□□□□ 0.16
RPAIN-206ENST00000539417 ZNF292O60281 2723 aa16.02■□□□□ 0.16
RPAIN-206ENST00000539417 ARHGAP6O43182 974 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 MAFKO60675 156 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 RNASEH1O60930 286 aaKnown RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 LEFTY1O75610 366 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 KRT10P13645 584 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 TGM1P22735 817 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 DHPSP49366 369 aaPredicted RBP16.02■□□□□ 0.15
RPAIN-206ENST00000539417 ZBTB16Q05516 673 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 LAIR1Q6GTX8 287 aa16.02■□□□□ 0.15
RPAIN-206ENST00000539417 HDDC3Q8N4P3 179 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms