RNA–Protein interactions for RNA: ENST00000539208.5

GNE-204, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 2 BASIC

Gene GNE, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-204ENST00000539208 MAGEA11P43364 429 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 C14orf80Q86SX3 495 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 PPHLN1Q8NEY8 458 aaKnown RBP18.2■□□□□ 0.5
GNE-204ENST00000539208 TTC8Q8TAM2 541 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 TBC1D13Q9NVG8 400 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 PNPOQ9NVS9 261 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 RBM22Q9NW64 420 aaKnown RBP eCLIP18.2■□□□□ 0.5
GNE-204ENST00000539208 IL37Q9NZH6 218 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 PLXNA3P51805 1871 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 SIN3BO75182 1162 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 HLA-DQB2P05538 268 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 COL6A2P12110 1019 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 ELNP15502 786 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 PGM1P36871 562 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 GMPRP36959 345 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 IDH3AP50213 366 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 PAPOLAP51003 745 aaKnown RBP18.2■□□□□ 0.5
GNE-204ENST00000539208 IRF9Q00978 393 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 GRM3Q14832 879 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 DLG2Q15700 870 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 RANBP10Q6VN20 620 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 MAVSQ7Z434 540 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 TNS4Q8IZW8 715 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 UMODL1-AS1Q8N2C9 162 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 IPMKQ8NFU5 416 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 FICDQ9BVA6 458 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 DONSONQ9NYP3 566 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 TCAF1Q9Y4C2 921 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 CDY1Q9Y6F8 540 aa18.2■□□□□ 0.5
GNE-204ENST00000539208 MYO16Q9Y6X6 1858 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 PRR5-ARHGAP8B1AHC4 643 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 SYN3O14994 580 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 TRIM13O60858 407 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 ARCN1P48444 511 aaKnown RBP18.19■□□□□ 0.5
GNE-204ENST00000539208 NDST2P52849 883 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 PRKAA2P54646 552 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 ARHGAP8P85298 464 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 DNAL1Q4LDG9 190 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 KHDC1Q4VXA5 237 aaKnown RBP18.19■□□□□ 0.5
GNE-204ENST00000539208 MAP3K21Q5TCX8 1036 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 PIK3R6Q5UE93 754 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 ZNF683Q8IZ20 524 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 ACVR1CQ8NER5 493 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 LINC01599Q8WXQ3 324 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 RSRC1Q96IZ7 334 aaKnown RBP18.19■□□□□ 0.5
GNE-204ENST00000539208 HHIPL1Q96JK4 782 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 C1QTNF1Q9BXJ1 281 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 TLK1Q9UKI8 766 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 SLC39A10Q9ULF5 831 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 PLA2G4CQ9UP65 541 aa18.19■□□□□ 0.5
GNE-204ENST00000539208 NYNRINQ9P2P1 1898 aaKnown RBP18.19■□□□□ 0.5
GNE-204ENST00000539208 AHSGP02765 367 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 COL6A1P12109 1028 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 CAP1Q01518 475 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 MBTPS1Q14703 1052 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 RBM15BQ8NDT2 890 aaKnown RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 NOL6Q9H6R4 1146 aaKnown RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 ARNT2Q9HBZ2 717 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 OXSMQ9NWU1 459 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 RNF186Q9NXI6 227 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 MPP6Q9NZW5 540 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 IPO11Q9UI26 975 aaKnown RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 NUDT5Q9UKK9 219 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 PCDHB5Q9Y5E4 795 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 DNAH12Q6ZR08 3092 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 E2F8A0AVK6 867 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 FAM92AA1XBS5 289 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 MOCS2O96007 188 aaPredicted RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 RHOQP17081 205 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 GABRB3P28472 473 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 GCKP35557 465 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 ABCG1P45844 678 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 OR1G1P47890 313 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 HNRNPDQ14103 355 aaKnown RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 POU6F1Q14863 301 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 GIMAP7Q8NHV1 300 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 MRGPRX2Q96LB1 330 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 PRKD2Q9BZL6 878 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 SLC25A51Q9H1U9 297 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 PRDM5Q9NQX1 630 aaPredicted RBP18.18■□□□□ 0.5
GNE-204ENST00000539208 TREX1Q9NSU2 369 aa18.18■□□□□ 0.5
GNE-204ENST00000539208 MOXD2PA6NHM9 499 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 GOLGA8TH3BQL2 631 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 PEX11BO96011 259 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 F7P08709 466 aaPredicted RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 CPA2P48052 419 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 TBX4P57082 545 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 KDSRQ06136 332 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 SLC12A1Q13621 1099 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 UBAP2LQ14157 1087 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 RCN2Q14257 317 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 DDR2Q16832 855 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP18.17■□□□□ 0.5
GNE-204ENST00000539208 TMEM151AQ8N4L1 468 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.17■□□□□ 0.5
GNE-204ENST00000539208 GLT1D1Q96MS3 346 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 FSD1LQ9BXM9 530 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 UBE2OQ9C0C9 1292 aaKnown RBP18.17■□□□□ 0.5
GNE-204ENST00000539208 CDH19Q9H159 772 aa18.17■□□□□ 0.5
GNE-204ENST00000539208 LRRC42Q9Y546 428 aa18.17■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms