RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 BCLAF3A2AJT9 711 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MCIDASD6RGH6 385 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 E7EVH7 732 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GTPBP1O00178 669 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MASP2O00187 686 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GRM8O00222 908 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PSMD9O00233 223 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PRYO14603 147 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RNMTO43148 476 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DHX16O60231 1041 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF623O75123 536 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ZBED4O75132 1171 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SEC31AO94979 1220 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SCAF4O95104 1147 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NDUFB4O95168 129 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 C22orf31O95567 290 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MMP2P08253 660 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ARSAP15289 507 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CHN1P15882 459 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LAG3P18627 525 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 COMTP21964 271 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PRKCHP24723 683 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MCM7P33993 719 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GALNSP34059 522 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HOXD12P35452 270 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DPP6P42658 865 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MMP14P50281 582 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CCR9P51686 369 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MVDP53602 400 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RNASELQ05823 741 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TFCP2Q12800 502 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 FOXI1Q12951 378 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CUL4AQ13619 759 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SLC12A1Q13621 1099 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 IRF3Q14653 427 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DNTTIP2Q5QJE6 756 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RARS2Q5T160 578 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NCEH1Q6PIU2 408 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TRILQ7L0X0 811 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GDF7Q7Z4P5 450 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CAND1Q86VP6 1230 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MON1AQ86VX9 555 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MARVELD2Q8N4S9 558 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 LSMEM1Q8N8F7 131 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RUFY2Q8WXA3 655 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 GRAMD1AQ96CP6 724 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RNF125Q96EQ8 232 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 EYA3Q99504 573 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PIP5K1AQ99755 562 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SLC26A6Q9BXS9 759 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ZNF341Q9BYN7 854 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 FAM129AQ9BZQ8 928 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PLEKHA4Q9H4M7 779 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 MRGBPQ9NV56 204 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ASIC5Q9NY37 505 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DLL3Q9NYJ7 618 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TRPM5Q9NZQ8 1165 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 FOXJ2Q9P0K8 574 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NLKQ9UBE8 527 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CNOT7Q9UIV1 285 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CAMK2AQ9UQM7 478 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 B3GNT3Q9Y2A9 372 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 TCAF1Q9Y4C2 921 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CEP83Q9Y592 693 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SPAG9O60271 1321 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CYP2D7A0A087X1C5 515 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PNMA6EA0A0J9YXQ4 647 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 A0A0U1RQG5 324 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CENPVL1A0A0U1RR11 272 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 BICDL2A1A5D9 508 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 FSD2A1L4K1 749 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NPIPB13A6NJU9 1138 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NPIPB5A8MRT5 1133 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NPIPB4C9JG80 1138 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 RPS6KA4O75676 772 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SLC16A8O95907 504 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 C8AP07357 584 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ENO3P13929 434 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 BMP7P18075 431 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ACO1P21399 889 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 IDUAP35475 653 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 POLD2P49005 469 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HARS2P49590 506 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CXCR3P49682 368 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 COMPP49747 757 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CLK3P49761 638 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 PRKAG1P54619 331 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CASP9P55211 416 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 E2F1Q01094 437 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DCTN2Q13561 401 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CDC37Q16543 378 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 CCNYL2Q5T2Q4 361 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NAA16Q6N069 864 aaPredicted RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 DPY19L2P1Q6NXN4 242 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 R3HCC1LQ7Z5L2 792 aaKnown RBP1.13□□□□□ -2.23
HIF1A-204ENST00000539097 NOXA1Q86UR1 476 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 SIRT6Q8N6T7 355 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 OR10S1Q8NGN2 331 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 HMGB4Q8WW32 186 aa1.13□□□□□ -2.23
HIF1A-204ENST00000539097 ZFPM2Q8WW38 1151 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms