RNA–Protein interactions for RNA: ENST00000538809.6

RAB40B-202, Transcript of RAB40B, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB40B, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40B-202ENST00000538809 OR2A12Q8NGT7 310 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 SHROOM3Q8TF72 1996 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 FAM131CQ96AQ9 280 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 ARRDC3Q96B67 414 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 SERAC1Q96JX3 654 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 CCDC114Q96M63 670 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 MCEEQ96PE7 176 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 TAS2R14Q9NYV8 317 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 AIPL1Q9NZN9 384 aa15.3■□□□□ 0.04
RAB40B-202ENST00000538809 PPARGC1AQ9UBK2 798 aaKnown RBP15.3■□□□□ 0.04
RAB40B-202ENST00000538809 GOLGA4Q13439 2230 aaKnown RBP15.29■□□□□ 0.04
RAB40B-202ENST00000538809 VILLO15195 856 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 FLRT2O43155 660 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 SLC7A4O43246 635 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 ZMPSTE24O75844 475 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 LRIG2O94898 1065 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 CHRNA3P32297 505 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 ACVRL1P37023 503 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 SERPINH1P50454 418 aaKnown RBP15.29■□□□□ 0.04
RAB40B-202ENST00000538809 CCT8P50990 548 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF423Q2M1K9 1284 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 FIGNQ5HY92 759 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 PRAMEF14Q5SWL7 426 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 PIP5KL1Q5T9C9 394 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 UNQ6494/PRO21346Q6UXR6 183 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF783Q6ZMS7 281 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 PYROXD2Q8N2H3 581 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 NTAN1Q96AB6 310 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 TBC1D31Q96DN5 1066 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 EDEM3Q9BZQ6 932 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 OSBPL2Q9H1P3 480 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 DNAI1Q9UI46 699 aa15.29■□□□□ 0.04
RAB40B-202ENST00000538809 FCF1Q9Y324 198 aaKnown RBP15.29■□□□□ 0.04
RAB40B-202ENST00000538809 FARP1Q9Y4F1 1045 aaPredicted RBP15.29■□□□□ 0.04
RAB40B-202ENST00000538809 A0A1W2PR77 199 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 TMCO5BA8MYB1 307 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 ATMINO43313 823 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 LATO43561 262 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 KRT37O76014 449 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 PLEKP08567 350 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 CD38P28907 300 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 RECQLP46063 649 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 CLCN6P51797 869 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 TAS2R38P59533 333 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 RPL7AP62424 266 aaKnown RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 FANCCQ00597 558 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 SCAPQ12770 1279 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 ZSCAN23Q3MJ62 389 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 NAPEPLDQ6IQ20 393 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 RETSATQ6NUM9 610 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 SCYL2Q6P3W7 929 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 DPY19L3Q6ZPD9 716 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF571Q7Z3V5 609 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 NLRP14Q86W24 1093 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 DNAAF5Q86Y56 855 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 BAHD1Q8TBE0 780 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 RHBDD1Q8TEB9 315 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 KLK6Q92876 244 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 VCPIP1Q96JH7 1222 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 MYOCQ99972 504 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 TMEM121BQ9BXQ6 578 aaPredicted RBP15.28■□□□□ 0.04
RAB40B-202ENST00000538809 HAUS4Q9H6D7 363 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 IL36AQ9UHA7 158 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 CA5BQ9Y2D0 317 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 PCDHGB2Q9Y5G2 931 aa15.28■□□□□ 0.04
RAB40B-202ENST00000538809 GOLGA8CPA6NN73 597 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 RNGTTO60942 597 aaKnown RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF821O75541 412 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 LEFTY1O75610 366 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 SERPINC1P01008 464 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 PRNPP04156 253 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 RHOQP17081 205 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 TNFAIP3P21580 790 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 MAPKAPK2P49137 400 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 DNA2P51530 1060 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ZNF143P52747 638 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 OGDHQ02218 1023 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ASIC2Q16515 512 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ARSIQ5FYB1 569 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 LEKR1Q6ZMV7 388 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 RAB44Q7Z6P3 723 aaPredicted RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 SLFN11Q7Z7L1 901 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 PRPF39Q86UA1 669 aaKnown RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 TRIM69Q86WT6 500 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 GATAD2AQ86YP4 633 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 GATA6Q92908 595 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ARHGEF2Q92974 986 aaKnown RBP15.27■□□□□ 0.04
RAB40B-202ENST00000538809 TM6SF2Q9BZW4 377 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 KDM4CQ9H3R0 1056 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 DYRK4Q9NR20 520 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 TMEM248Q9NWD8 314 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 ARHGAP20Q9P2F6 1191 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 NEUROG3Q9Y4Z2 214 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 WASF2Q9Y6W5 498 aa15.27■□□□□ 0.04
RAB40B-202ENST00000538809 A0A1B0GTQ1 180 aa15.26■□□□□ 0.03
RAB40B-202ENST00000538809 A0A1W2PQJ5 194 aa15.26■□□□□ 0.03
RAB40B-202ENST00000538809 ANKRD62A6NC57 917 aa15.26■□□□□ 0.03
RAB40B-202ENST00000538809 DDX3XO00571 662 aaKnown RBP eCLIP15.26■□□□□ 0.032e-22■■■■□ 20.3
RAB40B-202ENST00000538809 TRIM16O95361 564 aa15.26■□□□□ 0.03
RAB40B-202ENST00000538809 CD160O95971 181 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms