RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 OR8H2Q8N162 312 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 RSPH9Q9H1X1 276 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 SATB2Q9UPW6 733 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 INVSQ9Y283 1065 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 BCL9O00512 1426 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 BCLAF3A2AJT9 711 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CD3EAPO15446 510 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PHGDHO43175 533 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 NBNO60934 754 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 LTA4HP09960 611 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PIK3R1P27986 724 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CLK3P49761 638 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 C15orf59Q2T9L4 293 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 INTS11Q5TA45 600 aaKnown RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 DCLRE1AQ6PJP8 1040 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 PIGZQ86VD9 579 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 APLFQ8IW19 511 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 USP6NLQ92738 828 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 MYLPFQ96A32 169 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 COL26A1Q96A83 441 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 OXNAD1Q96HP4 312 aaPredicted RBP17.03■□□□□ 0.32
SCARB1-205ENST00000538291 RABGEF1Q9UJ41 708 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 L1RE1Q9UN81 338 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 N6AMT1Q9Y5N5 214 aa17.03■□□□□ 0.32
SCARB1-205ENST00000538291 CENPXA8MT69 81 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 IL1BP01584 269 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 PSMB4P28070 264 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 CSNK2BP67870 215 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 LLGL2Q6P1M3 1020 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 AFTPHQ6ULP2 937 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 MTFMTQ96DP5 389 aaKnown RBP17.02■□□□□ 0.32
SCARB1-205ENST00000538291 TM6SF2Q9BZW4 377 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 CCDC167Q9P0B6 97 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 ZNHIT2Q9UHR6 403 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 UBIAD1Q9Y5Z9 338 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 PSMD10O75832 226 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 TTPAP49638 278 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 FKBP1BP68106 108 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 SAMD4BQ5PRF9 694 aaKnown RBP17.02■□□□□ 0.32
SCARB1-205ENST00000538291 CDT1Q9H211 546 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 DNAJC18Q9H819 358 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 KLHL1Q9NR64 748 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 GIT1Q9Y2X7 761 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 SLIT1O75093 1534 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 A0A0B4J269 797 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 URADA6NGE7 173 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 MEI4A8MW99 385 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 UBOX5O94941 541 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 FTH1P02794 183 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 HIST1H2ABP04908 130 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 SNX30Q5VWJ9 437 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 IZUMO2Q6UXV1 221 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 DET1Q7L5Y6 550 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 HIST3H2AQ7L7L0 130 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 ZCCHC9Q8N567 271 aaKnown RBP17.02■□□□□ 0.32
SCARB1-205ENST00000538291 HIST1H2ACQ93077 130 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 MCCC1Q96RQ3 725 aaPredicted RBP17.02■□□□□ 0.32
SCARB1-205ENST00000538291 EXO5Q9H790 373 aa17.02■□□□□ 0.32
SCARB1-205ENST00000538291 CHADO15335 359 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 CD52P31358 61 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 NDUFV1P49821 464 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 GTF2BQ00403 316 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 LYPLAL1Q5VWZ2 237 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 C11orf88Q6PI97 169 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 FAM183BPQ6ZVS7 135 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 STK32CQ86UX6 486 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 SCAIQ8N9R8 606 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 ANKRD52Q8NB46 1076 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 ITFG1Q8TB96 612 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 ETNPPLQ8TBG4 499 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 MTMR9Q96QG7 549 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 TMEM216Q9P0N5 145 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 ST3GAL5Q9UNP4 418 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 C2CD2Q9Y426 696 aa17.02■□□□□ 0.31
SCARB1-205ENST00000538291 TISP43B9A030 160 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 TBC1D12O60347 775 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 CLPTM1O96005 669 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ZCCHC18P0CG32 403 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 OR52K1Q8NGK4 314 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 WDR18Q9BV38 432 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ALG9Q9H6U8 611 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PTCH2Q9Y6C5 1203 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 SCAMP3O14828 347 aaKnown RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 MYL12BO14950 172 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 TLL1O43897 1013 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ME2P23368 584 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 ABL2P42684 1182 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 COX10Q12887 443 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PEX6Q13608 980 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PFKFB4Q16877 469 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 TMC3Q7Z5M5 1100 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 EFCAB3Q8N7B9 438 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 HDHD2Q9H0R4 259 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PAIP2BQ9ULR5 123 aaKnown RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 LBPP18428 481 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PRKAG1P54619 331 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 CASP7P55210 303 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 SMAD3P84022 425 aaKnown RBP17.01■□□□□ 0.31
SCARB1-205ENST00000538291 PPP3CAQ08209 521 aa17.01■□□□□ 0.31
SCARB1-205ENST00000538291 SPRTNQ9H040 489 aaPredicted RBP17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms