RNA–Protein interactions for RNA: ENST00000538235.2

CHFR-216, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 3

Gene CHFR, Length 687 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-216ENST00000538235 GALNT2Q10471 571 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 ZNF528Q3MIS6 628 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 POM121L1PQ3SYA9 428 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 DPY19L3Q6ZPD9 716 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 TRMT11Q7Z4G4 463 aaKnown RBP13.34□□□□□ -0.27
CHFR-216ENST00000538235 CCDC117Q8IWD4 279 aaPredicted RBP13.34□□□□□ -0.27
CHFR-216ENST00000538235 AADATQ8N5Z0 425 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 ATP11CQ8NB49 1132 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 OR2T3Q8NH03 318 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 KIAA1524Q8TCG1 905 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 HES6Q96HZ4 224 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 OLFM3Q96PB7 478 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 RSPH9Q9H1X1 276 aaPredicted RBP13.34□□□□□ -0.27
CHFR-216ENST00000538235 RETREG1Q9H6L5 497 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 USP36Q9P275 1121 aaKnown RBP13.34□□□□□ -0.27
CHFR-216ENST00000538235 SLC25A13Q9UJS0 675 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 PLA2G4CQ9UP65 541 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 WDR87Q6ZQQ6 2873 aa13.34□□□□□ -0.27
CHFR-216ENST00000538235 PCDH15Q96QU1 1955 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 IGHV1OR15-9A0A0B4J2B8 117 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 ZNF487B1APH4 448 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 C10orf142B7Z368 130 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 NPC1O15118 1278 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 P2RY2P41231 377 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 ZNF135P52742 658 aaPredicted RBP13.33□□□□□ -0.28
CHFR-216ENST00000538235 NAP1L1P55209 391 aaKnown RBP13.33□□□□□ -0.28
CHFR-216ENST00000538235 SULT2A1Q06520 285 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 SLC10A7Q0GE19 358 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 KIAA1324Q6UXG2 1013 aaKnown RBP13.33□□□□□ -0.28
CHFR-216ENST00000538235 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 LONP2Q86WA8 852 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 TMPRSS6Q8IU80 811 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 CAMKK1Q8N5S9 505 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 ARRDC3Q96B67 414 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 HAUS1Q96CS2 278 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 FAM118BQ9BPY3 351 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 ZSCAN32Q9NX65 697 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 TRMT1Q9NXH9 659 aaKnown RBP13.33□□□□□ -0.28
CHFR-216ENST00000538235 IPO11Q9UI26 975 aaKnown RBP13.33□□□□□ -0.28
CHFR-216ENST00000538235 SLCO1B1Q9Y6L6 691 aa13.33□□□□□ -0.28
CHFR-216ENST00000538235 GON4LQ3T8J9 2241 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 MID1O15344 667 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 SPINT1O43278 529 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 BNIP3LO60238 219 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 PTMAP06454 111 aaKnown RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 ETFBP38117 255 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 PSMD8P48556 350 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 CCNHP51946 323 aaPredicted RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 NRLP54845 237 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 CCDC173Q0VFZ6 552 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 LPAL2Q16609 132 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 KCTD19Q17RG1 926 aaPredicted RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 MEI1Q5TIA1 1274 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 KAZNQ674X7 775 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 PEX26Q7Z412 305 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 ZSWIM9Q86XI8 627 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 VSIG1Q86XK7 387 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 RFX6Q8HWS3 928 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 MMAAQ8IVH4 418 aaKnown RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 TSEN2Q8NCE0 465 aaKnown RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 EXD1Q8NHP7 514 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 GRIN3AQ8TCU5 1115 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 FAM131CQ96AQ9 280 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 LGMNQ99538 433 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 HEMGNQ9BXL5 484 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 TLR10Q9BXR5 811 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 C10orf88Q9H8K7 445 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 POLMQ9NP87 494 aaPredicted RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 DDX56Q9NY93 547 aaKnown RBP13.32□□□□□ -0.28
CHFR-216ENST00000538235 CYP8B1Q9UNU6 501 aa13.32□□□□□ -0.28
CHFR-216ENST00000538235 PI4KAP42356 2102 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 TARSL2A2RTX5 802 aaKnown RBP13.31□□□□□ -0.28
CHFR-216ENST00000538235 ARHGAP42A6NI28 874 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 KRT86O43790 486 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 CST8O60676 142 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 CR2P20023 1033 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 GARSP41250 739 aaKnown RBP13.31□□□□□ -0.28
CHFR-216ENST00000538235 NBL1P41271 181 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 TPMTP51580 245 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 PTPN5P54829 565 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 ST8SIA6P61647 398 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 IL10RBQ08334 325 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 ZBTB17Q13105 803 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 STARD3Q14849 445 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 CST6Q15828 149 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 PPP2R5EQ16537 467 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 ACCSLQ4AC99 568 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 ZFYVE27Q5T4F4 411 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 KBTBD6Q86V97 674 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 ZNF354CQ86Y25 554 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 RNF10Q8N5U6 811 aaKnown RBP13.31□□□□□ -0.28
CHFR-216ENST00000538235 SUMF1Q8NBK3 374 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 CCDC26Q8TAB7 109 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 GAB3Q8WWW8 586 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 MAML1Q92585 1016 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 CEP41Q9BYV8 373 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 TSGA10Q9BZW7 698 aa13.31□□□□□ -0.28
CHFR-216ENST00000538235 DUSP15Q9H1R2 295 aaPredicted RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms