RNA–Protein interactions for RNA: ENST00000538177.5

SLC28A1-204, Transcript of solute carrier family 28 member 1, humanhuman

TSL 2 BASIC

Gene SLC28A1, Length 2,155 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-204ENST00000538177 ARCN1P48444 511 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 TUBB3Q13509 450 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 GRM3Q14832 879 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 CTXN3Q4LDR2 81 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ARMC3Q5W041 872 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 LHX8Q68G74 356 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ATAD1Q8NBU5 361 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ACVR1CQ8NER5 493 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PXYLP1Q8TE99 480 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PPP4R1Q8TF05 950 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 MRGPRX2Q96LB1 330 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 EBF4Q9BQW3 602 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 CCDC106Q9BWC9 280 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 FAM96AQ9H5X1 160 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 CAB39LQ9H9S4 337 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 RNPEPL1Q9HAU8 725 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 DONSONQ9NYP3 566 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 NOP53Q9NZM5 478 aaKnown RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 ANKRD6Q9Y2G4 727 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 TCAF1Q9Y4C2 921 aa11.6□□□□□ -0.55
SLC28A1-204ENST00000538177 PLXNA3P51805 1871 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 IGLV3-10A0A075B6K4 115 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 E2F8A0AVK6 867 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 AOC2O75106 756 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 SIN3BO75182 1162 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ANP32DO95626 131 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ALOX15P16050 662 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 FGFR3P22607 806 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 DNAJB1P25685 340 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 GABRB3P28472 473 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ARRB2P32121 409 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 POLD2P49005 469 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 IRF9Q00978 393 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ITGA9Q13797 1035 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 HNRNPDQ14103 355 aaKnown RBP11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 POU6F1Q14863 301 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 UGP2Q16851 508 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 MS4A13Q5J8X5 152 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 LCA5Q86VQ0 697 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 PPHLN1Q8NEY8 458 aaKnown RBP11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 RILPQ96NA2 401 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ZYG11BQ9C0D3 744 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 SLC25A51Q9H1U9 297 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 MMADHCQ9H3L0 296 aaPredicted RBP11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 NMRAL1Q9HBL8 299 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 ARNT2Q9HBZ2 717 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 STARD7Q9NQZ5 370 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 TMEM248Q9NWD8 314 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 PCDHB12Q9Y5F1 795 aa11.59□□□□□ -0.55
SLC28A1-204ENST00000538177 MYO16Q9Y6X6 1858 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 GOLGA8TH3BQL2 631 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ARVCFO00192 962 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ENPP3O14638 875 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 PMPCBO75439 489 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 RTN3O95197 1032 aaPredicted RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 AHSGP02765 367 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 APOA4P06727 396 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 SELPP16109 830 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 YWHAQP27348 245 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ARNTP27540 789 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TRIP4Q15650 581 aaPredicted RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 FAM171A1Q5VUB5 890 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ZNF280DQ6N043 979 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ESRP1Q6NXG1 681 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 KDELC1Q6UW63 502 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 LRRC8DQ7L1W4 858 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TNS4Q8IZW8 715 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TTC9BQ8N6N2 239 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TEX9Q8N6V9 391 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ENDOVQ8N8Q3 282 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ATP6V0D2Q8N8Y2 350 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 C1QTNF1Q9BXJ1 281 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 GPR62Q9BZJ7 368 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TREX1Q9NSU2 369 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 OLA1Q9NTK5 396 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 PNPOQ9NVS9 261 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 DNAJC28Q9NX36 388 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TAGLN3Q9UI15 199 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 MID2Q9UJV3 735 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 SLC39A10Q9ULF5 831 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 NYNRINQ9P2P1 1898 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 CCDC78A2IDD5 438 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TMEM114B3SHH9 223 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ZNF195O14628 629 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 H2AFYO75367 372 aaKnown RBP11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 VAPBO95292 243 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 MYL4P12829 197 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 AOC1P19801 751 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 PSEN1P49768 467 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 RENBPP51606 427 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 CCNG1P51959 295 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 WNT3AP56704 352 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 TNK2Q07912 1038 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 EFEMP1Q12805 493 aa11.58□□□□□ -0.56
SLC28A1-204ENST00000538177 ACCSLQ4AC99 568 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms