RNA–Protein interactions for RNA: ENST00000538021.5

CLPB-208, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 1 (best)

Gene CLPB, Length 1,108 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-208ENST00000538021 NOS2P35228 1153 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 VASPP50552 380 aaPredicted RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 OXCT1P55809 520 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 RPS21P63220 83 aaKnown RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 CUL2Q13617 745 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 FGL2Q14314 439 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 PRRT3Q5FWE3 981 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 ARSIQ5FYB1 569 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 RABGAP1LQ5R372 815 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 TPRG1LQ5T0D9 272 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 HIST2H2BCQ6DN03 193 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 CXorf57Q6NSI4 855 aaKnown RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 ESRP1Q6NXG1 681 aaKnown RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 LCLAT1Q6UWP7 414 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 ZFAND4Q86XD8 727 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 RBFAQ8N0V3 343 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 SH2D3CQ8N5H7 860 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 ATP11CQ8NB49 1132 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 GRIN3AQ8TCU5 1115 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 BTN2A2Q8WVV5 523 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 BTN2A3PQ96KV6 586 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 CCDC114Q96M63 670 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 PSMG3-AS1Q96PY0 264 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 GFM1Q96RP9 751 aaKnown RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 FEM1AQ9BSK4 669 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 TCEAL2Q9H3H9 227 aaPredicted RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 LRRC4CQ9HCJ2 640 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 FAM13BQ9NYF5 915 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 GULP1Q9UBP9 304 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 APOBEC3BQ9UH17 382 aaKnown RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 SERTAD1Q9UHV2 236 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 ACSL6Q9UKU0 697 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 MTMR6Q9Y217 621 aa11.41□□□□□ -0.58
CLPB-208ENST00000538021 USP9YO00507 2555 aaPredicted RBP11.41□□□□□ -0.58
CLPB-208ENST00000538021 TRPM6Q9BX84 2022 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 ZFC3H1O60293 1989 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 PRAMEF33A0A0G2JMD5 474 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 CLEC18AA5D8T8 446 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 TCAF2A6NFQ2 919 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 ENO4A6NNW6 628 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 RNF103O00237 685 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 FPGTO14772 594 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 NVLO15381 856 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 PRAMEF10O60809 474 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 PRNPP04156 253 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 SRCP12931 536 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 ITIH1P19827 911 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 RPL13P26373 211 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 YWHAEP62258 255 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 ENPEPQ07075 957 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 EIF2B5Q13144 721 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 ADAM9Q13443 819 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 MORC3Q14149 939 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 NCAPHQ15003 741 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 C8orf34Q49A92 452 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 TTC39BQ5VTQ0 682 aaPredicted RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 SYPL2Q5VXT5 272 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 CLEC18BQ6UXF7 455 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 SDR16C5Q8N3Y7 309 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 ATP6V0D2Q8N8Y2 350 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 CLEC18CQ8NCF0 446 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 CHST14Q8NCH0 376 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 TMIEQ8NEW7 156 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 TFAP2BQ92481 460 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 ALG14Q96F25 216 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 PAGE5Q96GU1 130 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 FEM1CQ96JP0 617 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 HSFY1Q96LI6 401 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 FUCA2Q9BTY2 467 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 CPEB1Q9BZB8 566 aaKnown RBP11.4□□□□□ -0.58
CLPB-208ENST00000538021 ADNPQ9H2P0 1102 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 SLC12A6Q9UHW9 1150 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 KIAA1257Q9ULG3 409 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 DOLKQ9UPQ8 538 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 MAPK8IP1Q9UQF2 711 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 LOXL2Q9Y4K0 774 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 NBASA2RRP1 2371 aa11.4□□□□□ -0.58
CLPB-208ENST00000538021 KCNU1A8MYU2 1149 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 D6RAR5 112 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 YY2O15391 372 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 MT-CO1P00395 513 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 RPLP0P05388 317 aaKnown RBP11.39□□□□□ -0.59
CLPB-208ENST00000538021 NEFLP07196 543 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 CASRP41180 1078 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 MAPK10P53779 464 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 CCL7P80098 99 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 CENPCQ03188 943 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 LRMPQ12912 555 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 KCNAB2Q13303 367 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 SGCGQ13326 291 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 CUL4AQ13619 759 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 TCEA2Q15560 299 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 KIAA1161Q6NSJ0 714 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 BORAQ6PGQ7 559 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 TMEM270Q6UE05 265 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 OR52K2Q8NGK3 314 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 OR2A12Q8NGT7 310 aa11.39□□□□□ -0.59
CLPB-208ENST00000538021 JPH3Q8WXH2 748 aaPredicted RBP11.39□□□□□ -0.59
CLPB-208ENST00000538021 CCDC74AQ96AQ1 378 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms