RNA–Protein interactions for RNA: ENST00000536634.5

CLIP1-207, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 3

Gene CLIP1, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-207ENST00000536634 EPHX3Q9H6B9 360 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 DNAJC18Q9H819 358 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 RGL1Q9NZL6 768 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 FZD4Q9ULV1 537 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF236Q9UL36 1845 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 ZFHX4Q86UP3 3567 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 SPTBN4Q9H254 2564 aa6.11□□□□□ -1.43
CLIP1-207ENST00000536634 KAT6AQ92794 2004 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 IL16Q14005 1332 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 GPR75-ASB3A0A0A6YYF3 556 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 KCNU1A8MYU2 1149 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 INO80B-WBP1J3KQ70 363 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 EYA2O00167 538 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 CCNT2O60583 730 aaKnown RBP6.1□□□□□ -1.43
CLIP1-207ENST00000536634 HOXC6P09630 235 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 GALNSP34059 522 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 MECOMQ03112 1051 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 SLC14A1Q13336 389 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 DNASE1L3Q13609 305 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 KLF9Q13886 244 aaPredicted RBP6.1□□□□□ -1.43
CLIP1-207ENST00000536634 GRB14Q14449 540 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 DAZAP2Q15038 168 aaPredicted RBP6.1□□□□□ -1.43
CLIP1-207ENST00000536634 WDR78Q5VTH9 848 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 MIS18BP1Q6P0N0 1132 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF813Q6ZN06 617 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 C1QL2Q7Z5L3 287 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF398Q8TD17 642 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 ABHD5Q8WTS1 349 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 C1QTNF1Q9BXJ1 281 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 PRSS22Q9GZN4 317 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 TMEM8AQ9HCN3 771 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 TMOD4Q9NZQ9 345 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 ZDBF2Q9HCK1 2354 aa6.1□□□□□ -1.43
CLIP1-207ENST00000536634 FOCADQ5VW36 1801 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 SLC15A5A6NIM6 579 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 KBTBD13C9JR72 458 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 BCAR3O75815 825 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 CLTBP09497 229 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 TMIGD3P0DMS9 266 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 EGR1P18146 543 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 DRD1P21728 446 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 SLC5A2P31639 672 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF81P51508 661 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 RAE1P78406 368 aaKnown RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 CCDC15Q0P6D6 951 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 DDX10Q13206 875 aaKnown RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 ZNF268Q14587 947 aaPredicted RBP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 SLC5A9Q2M3M2 681 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 C4orf46Q504U0 113 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 PRAMEF19Q5SWL8 479 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 IZUMO3Q5VZ72 239 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 RANBP10Q6VN20 620 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 CNGA4Q8IV77 575 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 FAM71DQ8N9W8 422 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 KIAA1191Q96A73 305 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 CCDC138Q96M89 665 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 C1QTNF7Q9BXJ2 289 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.09□□□□□ -1.43
CLIP1-207ENST00000536634 SIL1Q9H173 461 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 NRIP3Q9NQ35 241 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 BTBD3Q9Y2F9 522 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 PCDHB2Q9Y5E7 798 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 PCDHGB2Q9Y5G2 931 aa6.09□□□□□ -1.43
CLIP1-207ENST00000536634 A0A0G2JMZ2 1700 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 LRRC37A2A6NM11 1700 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 OR2W5A6NFC9 320 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 C19orf81C9J6K1 198 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 FCHO1O14526 889 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 TP73O15350 636 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 SEPT4O43236 478 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 ASNSP08243 561 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 LMO1P25800 156 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 EEF1GP26641 437 aaKnown RBP6.08□□□□□ -1.44
CLIP1-207ENST00000536634 AK2P54819 239 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 ATP1A4Q13733 1029 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 KCNJ12Q14500 433 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 MAP9Q49MG5 647 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 CCDC184Q52MB2 194 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 TMEM196Q5HYL7 178 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 TMTC4Q5T4D3 741 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 MORN5Q5VZ52 161 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 FAM90A2PQ658T7 463 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 VSTM1Q6UX27 236 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 MAP4K1Q92918 833 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 NSUN4Q96CB9 384 aaKnown RBP6.08□□□□□ -1.44
CLIP1-207ENST00000536634 USP44Q9H0E7 712 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 PRKRIP1Q9H875 184 aaPredicted RBP6.08□□□□□ -1.44
CLIP1-207ENST00000536634 CHST12Q9NRB3 414 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 HERC5Q9UII4 1024 aaKnown RBP6.08□□□□□ -1.44
CLIP1-207ENST00000536634 RABGAP1Q9Y3P9 1069 aa6.08□□□□□ -1.44
CLIP1-207ENST00000536634 PDS5AQ29RF7 1337 aaKnown RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 CYP2D7A0A087X1C5 515 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 ZSCAN9O15535 394 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 PGK1P00558 417 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 IDEP14735 1019 aa6.07□□□□□ -1.44
CLIP1-207ENST00000536634 ATP5F1P24539 256 aaPredicted RBP6.07□□□□□ -1.44
CLIP1-207ENST00000536634 HSPA7P48741 367 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms