RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 BRCC3P46736 316 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 UQCRFS1P47985 274 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ST3GAL1Q11201 340 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ILKQ13418 452 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 MTF1Q14872 753 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 FIGNQ5HY92 759 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 DCAF12L1Q5VU92 463 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 TSHZ3Q63HK5 1081 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 KLHDC10Q6PID8 442 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ARHGAP36Q6ZRI8 547 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 TAOK1Q7L7X3 1001 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 TRMT11Q7Z4G4 463 aaKnown RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 ITIH5Q86UX2 942 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 HEATR4Q86WZ0 1026 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 PLA2G4DQ86XP0 818 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 FAM114A1Q8IWE2 563 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 FTSJ3Q8IY81 847 aaKnown RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 EFCAB13Q8IY85 973 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ELOA2Q8IYF1 753 aaPredicted RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 BCL6BQ8N143 479 aaPredicted RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 ZNF366Q8N895 744 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 MAB21L3Q8N8X9 362 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 PIGOQ8TEQ8 1089 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 OSCP1Q8WVF1 389 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 DNASE2BQ8WZ79 361 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 USP13Q92995 863 aaPredicted RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 IGSF8Q969P0 613 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 RRP36Q96EU6 259 aaKnown RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 SEC16BQ96JE7 1060 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 RPL10LQ96L21 214 aaKnown RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 DEPDC7Q96QD5 511 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 JPH2Q9BR39 696 aaPredicted RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 SH2D3AQ9BRG2 576 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ZNF577Q9BSK1 485 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 KRTAP2-2Q9BYT5 123 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 MINDY3Q9H8M7 445 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 KIF9Q9HAQ2 790 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 IFT122Q9HBG6 1241 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 CASS4Q9NQ75 786 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 TDP1Q9NUW8 608 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 SYBUQ9NX95 663 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 DONSONQ9NYP3 566 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 EIF2B4Q9UI10 523 aaKnown RBP4.24□□□□□ -1.73
YBX3-205ENST00000536107 FBXL5Q9UKA1 691 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 MAFFQ9ULX9 164 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ANKRD6Q9Y2G4 727 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ASB3Q9Y575 518 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 COL4A3BPQ9Y5P4 624 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 ADAMTS9Q9P2N4 1935 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 DOCK5Q9H7D0 1870 aa4.24□□□□□ -1.73
YBX3-205ENST00000536107 EML5Q05BV3 1969 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 PCDH15Q96QU1 1955 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CABIN1Q9Y6J0 2220 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 NEDD4P46934 1319 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 MTCL1Q9Y4B5 1905 aaKnown RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 UBE2QL1A1L167 161 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 TMEM150BA6NC51 233 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 TBC1D3BA6NDS4 549 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 BTBD18B2RXH4 712 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 FOXP2O15409 715 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CHMP2AO43633 222 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 TSPAN1O60635 241 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 HMMRO75330 724 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 H2AFYO75367 372 aaKnown RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 NFATC1O95644 943 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 KRT7P08729 469 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CT47B1P0C2W7 299 aaPredicted RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 RNF224P0DH78 156 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 AXLP30530 894 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 AVPR1BP47901 424 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CLCNKBP51801 687 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 C21orf59P57076 290 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 E2F1Q01094 437 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 SLFN5Q08AF3 891 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CLCA4Q14CN2 919 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 VEPH1Q14D04 833 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 ALX1Q15699 326 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 GPR19Q15760 415 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 ERCC6LQ2NKX8 1250 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 C3orf38Q5JPI3 329 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 PRAMEF14Q5SWL7 426 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 SP5Q6BEB4 398 aaPredicted RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 ZNF280DQ6N043 979 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CDR2LQ86X02 465 aaPredicted RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 TBC1D10CQ8IV04 446 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 SFTPA1Q8IWL2 248 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 FAM9BQ8IZU0 186 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 BOLLQ8N9W6 283 aaKnown RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 RNF149Q8NC42 400 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 CPT1CQ8TCG5 803 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 PRPF31Q8WWY3 499 aaKnown RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 PSPC1Q8WXF1 523 aaKnown RBP4.23□□□□□ -1.73
YBX3-205ENST00000536107 MIB2Q96AX9 1013 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 MYEOVQ96EZ4 313 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 PGBD1Q96JS3 809 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 PNKPQ96T60 521 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 SPATA5L1Q9BVQ7 753 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 SERHL2Q9H4I8 314 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 TRPC7Q9HCX4 862 aa4.23□□□□□ -1.73
YBX3-205ENST00000536107 ZNF71Q9NQZ8 489 aaPredicted RBP4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms