RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 SIX2Q9NPC8 291 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 PIGVQ9NUD9 493 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 VPS51Q9UID3 782 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 VANGL2Q9ULK5 521 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 WASF2Q9Y6W5 498 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 U3KQA8 63 aa11.48□□□□□ -0.57
CLSTN3-206ENST00000535668 SPTY2D1-AS1A0A0U1RR47 76 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 GOLGA8CPA6NN73 597 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 C1QL1O75973 258 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 LSM8O95777 96 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 MT-CO3P00414 261 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 CSF2P04141 144 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 ERBB2P04626 1255 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 THEGLP0DJG4 465 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 NME1P15531 152 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC9A1P19634 815 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 GLDCP23378 1020 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 ITGB7P26010 798 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 ITPKBP27987 946 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 AKT2P31751 481 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 UCNP55089 124 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 CENPCQ03188 943 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 C19orf57Q0VDD7 668 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 KYAT3Q6YP21 454 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 GCNT7Q6ZNI0 430 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 FAM183BPQ6ZVS7 135 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC22A18ASQ8N1D0 253 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 PCDH20Q8N6Y1 951 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 DENND6BQ8NEG7 585 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 RAB7BQ96AH8 199 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 PPP1R16AQ96I34 528 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 WDCPQ9H6R7 721 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 ANLNQ9NQW6 1124 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 KIAA1468Q9P260 1216 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 SALL4Q9UJQ4 1053 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 TMEM59LQ9UK28 342 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 STAP1Q9ULZ2 295 aa11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 ZFR2Q9UPR6 939 aaKnown RBP11.47□□□□□ -0.57
CLSTN3-206ENST00000535668 A0A1W2PQU0 124 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 M0QYT0 321 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 ERVH48-1M5A8F1 160 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 FOXN3O00409 490 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 SMAD6O43541 496 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 OPA1O60313 960 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 BRINP1O60477 761 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 CNTN5O94779 1100 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 ADCY5O95622 1261 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 DUSP3P51452 185 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 HNRNPKP61978 463 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 RPS21P63220 83 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 ALFQ53S48 1182 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 MANEALQ5VSG8 457 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 KLHL10Q6JEL2 608 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 RETSATQ6NUM9 610 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 PCSK4Q6UW60 755 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 GPR155Q7Z3F1 870 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 CIR1Q86X95 450 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 ZNF248Q8NDW4 579 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 TPCN2Q8NHX9 752 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 ARRDC3Q96B67 414 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 BMFQ96LC9 184 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 KLF6Q99612 283 aaPredicted RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 NAA15Q9BXJ9 866 aaKnown RBP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 DPH1Q9BZG8 443 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 TKTL2Q9H0I9 626 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 CTNND2Q9UQB3 1225 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 FADS3Q9Y5Q0 445 aa11.46□□□□□ -0.57
CLSTN3-206ENST00000535668 RP1P56715 2156 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 COL27A1Q8IZC6 1860 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 A0A0D9SEW6 157 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 A6NNZ2 444 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 TSPAN6O43657 245 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 TCEA3O75764 348 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 CD160O95971 181 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ALPPL2P10696 532 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 L1CAMP32004 1257 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 KRT9P35527 623 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ETFBP38117 255 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 RABIFP47224 123 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 SERPINH1P50454 418 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 NEK3P51956 506 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 PFN3P60673 137 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 FZD2Q14332 565 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ACCSLQ4AC99 568 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 CT47A1Q5JQC4 288 aaPredicted RBP11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ZCCHC8Q6NZY4 707 aaKnown RBP11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 C22orf39Q6P5X5 142 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 LRRC31Q6UY01 552 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 DPY19L3Q6ZPD9 716 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 SLC47A2Q86VL8 602 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 SPACA3Q8IXA5 215 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 SDR16C5Q8N3Y7 309 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 MLKLQ8NB16 471 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 ATP11CQ8NB49 1132 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 TMEM35BQ8NCS4 154 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 OR13H1Q8NG92 308 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 WDR48Q8TAF3 677 aa11.45□□□□□ -0.58
CLSTN3-206ENST00000535668 RNF34Q969K3 372 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms