RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 PPP1R16AQ96I34 528 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 CEP44Q9C0F1 390 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 TNKS2Q9H2K2 1166 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 ADAM22Q9P0K1 906 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 ZNF212Q9UDV6 495 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 IL36AQ9UHA7 158 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 ANKRD11Q6UB99 2663 aaPredicted RBP16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 FAM208BQ5VWN6 2430 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 DMXL2Q8TDJ6 3036 aa16.54■□□□□ 0.24
CLSTN3-204ENST00000535313 PKD1L2Q7Z442 2459 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 C2CD4BA6NLJ0 364 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 CALB1P05937 261 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 KRT3P12035 628 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 UNGP13051 313 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 EPHA8P29322 1005 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 PTPN9P43378 593 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 RXRGP48443 463 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 DNA2P51530 1060 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 TAS2R38P59533 333 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 NRG1Q02297 640 aaPredicted RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 SHBQ15464 509 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 ARSIQ5FYB1 569 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 ARTNQ5T4W7 220 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 DPY19L3Q6ZPD9 716 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 ERN2Q76MJ5 926 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 PCDH20Q8N6Y1 951 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 JOSD2Q8TAC2 188 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 GRIN3AQ8TCU5 1115 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 ARRDC3Q96B67 414 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 SELENOOQ9BVL4 669 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 OSBPL2Q9H1P3 480 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 RETREG1Q9H6L5 497 aa16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 SEPT11Q9NVA2 429 aaKnown RBP16.53■□□□□ 0.24
CLSTN3-204ENST00000535313 FREM2Q5SZK8 3169 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 GOLGA4Q13439 2230 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 DOCK4Q8N1I0 1966 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 A0A1W2PQU0 124 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 SLC31A1O15431 190 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 LEFTY1O75610 366 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 ZMPSTE24O75844 475 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 GJB6O95452 261 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 LDOC1O95751 146 aaPredicted RBP16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 RHOQP17081 205 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 MAPKAPK2P49137 400 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 CLEC16AQ2KHT3 1053 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 RAB6CQ53S08 254 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 HORMAD1Q86X24 394 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 PHF13Q86YI8 300 aaPredicted RBP16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 FAM172AQ8WUF8 416 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 KLHDC7BQ96G42 594 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 CNDP2Q96KP4 475 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 PCDHB18PQ96TA0 734 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 HDAC8Q9BY41 377 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 RAB6CQ9H0N0 254 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 CCDC86Q9H6F5 360 aaKnown RBP16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 HPCAL4Q9UM19 191 aa16.52■□□□□ 0.24
CLSTN3-204ENST00000535313 TP53BP1Q12888 1972 aaPredicted RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 LRRC10BA6NIK2 292 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 ENC1O14682 589 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 PCDH8O95206 1070 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 MBD3O95983 291 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 PLEKP08567 350 aaPredicted RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 CCDC172P0C7W6 258 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 GPD1P21695 349 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 AKT2P31751 481 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 GSCP56915 257 aaPredicted RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 GEMIN4P57678 1058 aaKnown RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 ARF5P84085 180 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 PTP4A2Q12974 167 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 CARD16Q5EG05 197 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 CCDC183Q5T5S1 534 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 MANEALQ5VSG8 457 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 PROSER1Q86XN7 944 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 SPATS2Q86XZ4 545 aaKnown RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 EID2Q8N6I1 236 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 CENPIQ92674 756 aaPredicted RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 KLK6Q92876 244 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 TBC1D31Q96DN5 1066 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 ERGIC2Q96RQ1 377 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 MYOCQ99972 504 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 HEPHQ9BQS7 1158 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 DNAI1Q9UI46 699 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 FCF1Q9Y324 198 aaKnown RBP16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 PCDHGA1Q9Y5H4 931 aa16.51■□□□□ 0.23
CLSTN3-204ENST00000535313 CXorf51AA0A1B0GTR3 108 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 ANKRD62A6NC57 917 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 ZNF821O75541 412 aaPredicted RBP16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 LRIG2O94898 1065 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 CDK4P11802 303 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 PRLRP16471 622 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 RFC1P35251 1148 aaPredicted RBP16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 ACVRL1P37023 503 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 NEK3P51956 506 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 HDAC4P56524 1084 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 BNIP3Q12983 259 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 SMAD1Q15797 465 aaKnown RBP16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 ZNF284Q2VY69 593 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 FBXL19Q6PCT2 694 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 DHRS13Q6UX07 377 aa16.5■□□□□ 0.23
CLSTN3-204ENST00000535313 NLRP14Q86W24 1093 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms