RNA–Protein interactions for RNA: ENST00000534401.5

PKP3-211, Transcript of plakophilin 3, humanhuman

TSL 3

Gene PKP3, Length 756 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-211ENST00000534401 SEMA4FO95754 770 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 CTSLP07711 333 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 DUOXA1Q1HG43 343 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 INO80DQ53TQ3 878 aaPredicted RBP21.78■■□□□ 1.08
PKP3-211ENST00000534401 WDR45BQ5MNZ6 344 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 SYCP2LQ5T4T6 812 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 FAM46CQ5VWP2 391 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 TCEAL6Q6IPX3 200 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 POLNQ7Z5Q5 900 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 RABEPKQ7Z6M1 372 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 FAM124AQ86V42 546 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 NETO1Q8TDF5 533 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 CASKIN2Q8WXE0 1202 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 TSC1Q92574 1164 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 TCEAL3Q969E4 200 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 RMDN1Q96DB5 314 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 HMCESQ96FZ2 354 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 ORAI3Q9BRQ5 295 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 C6orf106Q9H6K1 298 aaPredicted RBP21.78■■□□□ 1.08
PKP3-211ENST00000534401 SPTLC3Q9NUV7 552 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 ACTL7AQ9Y615 435 aa21.78■■□□□ 1.08
PKP3-211ENST00000534401 CNOT1A5YKK6 2376 aaKnown RBP21.77■■□□□ 1.08
PKP3-211ENST00000534401 A0A1W2PP55 124 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 KHNYNO15037 678 aaKnown RBP21.77■■□□□ 1.08
PKP3-211ENST00000534401 SLC7A4O43246 635 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 GDF9O60383 454 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 IL1BP01584 269 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 SERPINF2P08697 491 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 ERCC2P18074 760 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 SDHBP21912 280 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 CHRNA3P32297 505 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 MAN1A1P33908 653 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 PSMD8P48556 350 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 ARSEP51690 589 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 METAP1P53582 386 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 IRX4P78413 519 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 DCAF12L1Q5VU92 463 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 DPY19L3Q6ZPD9 716 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 ARHGAP12Q8IWW6 846 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 PIP4K2CQ8TBX8 421 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 CCDC114Q96M63 670 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 PANX2Q96RD6 677 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 OSGEPQ9NPF4 335 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 CTTNBP2NLQ9P2B4 639 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 HPCAL4Q9UM19 191 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 ZBTB32Q9Y2Y4 487 aaPredicted RBP21.77■■□□□ 1.08
PKP3-211ENST00000534401 WASF2Q9Y6W5 498 aa21.77■■□□□ 1.08
PKP3-211ENST00000534401 ASCC3Q8N3C0 2202 aaKnown RBP21.76■■□□□ 1.07
PKP3-211ENST00000534401 LNP1A1A4G5 178 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 SLC30A4O14863 429 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 TM4SF5O14894 197 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 CARD16Q5EG05 197 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 KCNT1Q5JUK3 1230 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 HDDC3Q8N4P3 179 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 C12orf50Q8NA57 414 aaPredicted RBP21.76■■□□□ 1.07
PKP3-211ENST00000534401 CHST14Q8NCH0 376 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 KDM4CQ9H3R0 1056 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 PDFQ9HBH1 243 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 PCDH18Q9HCL0 1135 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 SLC6A14Q9UN76 642 aa21.76■■□□□ 1.07
PKP3-211ENST00000534401 FARP1Q9Y4F1 1045 aaPredicted RBP21.76■■□□□ 1.07
PKP3-211ENST00000534401 DOCK9Q9BZ29 2069 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 C1QTNF3-AMACRE9PGA6 284 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 RNF103O00237 685 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 GSRP00390 522 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 IGHV4-34P06331 123 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 IL4RP24394 825 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 CCR5P51681 352 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 RSPO4Q2I0M5 234 aaPredicted RBP21.75■■□□□ 1.07
PKP3-211ENST00000534401 TRIM61Q5EBN2 209 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 PPP6R3Q5H9R7 873 aaPredicted RBP21.75■■□□□ 1.07
PKP3-211ENST00000534401 CPNE8Q86YQ8 564 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 CCDC170Q8IYT3 715 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 LZTR1Q8N653 840 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 OR2T34Q8NGX1 318 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 SLC35G2Q8TBE7 412 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 BIRC7Q96CA5 298 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 OMDQ99983 421 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 SLC39A8Q9C0K1 460 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 TNKS2Q9H2K2 1166 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 ZWILCHQ9H900 591 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 RCOR3Q9P2K3 495 aaPredicted RBP21.75■■□□□ 1.07
PKP3-211ENST00000534401 SUSD2Q9UGT4 822 aa21.75■■□□□ 1.07
PKP3-211ENST00000534401 FCF1Q9Y324 198 aaKnown RBP21.75■■□□□ 1.07
PKP3-211ENST00000534401 H3BRJ5 948 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 CDX4O14627 284 aaPredicted RBP21.74■■□□□ 1.07
PKP3-211ENST00000534401 PRAMEF11O60813 436 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 RNASEH2AO75792 299 aaKnown RBP21.74■■□□□ 1.07
PKP3-211ENST00000534401 PRNPP04156 253 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 MAOBP27338 520 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 ARHGAP25P42331 645 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 ID4P47928 161 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 ADPRHP54922 357 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 HADHBP55084 474 aaKnown RBP21.74■■□□□ 1.07
PKP3-211ENST00000534401 CNTN1Q12860 1018 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 SMTNL2Q2TAL5 461 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 AGBL4Q5VU57 503 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 KIAA0895LQ68EN5 471 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 RHOT2Q8IXI1 618 aa21.74■■□□□ 1.07
PKP3-211ENST00000534401 NPWQ8N729 165 aa21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms