RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 CBX4O00257 560 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 FOXN3O00409 490 aaPredicted RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 RIOK3O14730 519 aaKnown RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 CBFA2T2O43439 604 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 BNIP3LO60238 219 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 ERBB2P04626 1255 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 THEGLP0DJG4 465 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 ALPPL2P10696 532 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 SRCP12931 536 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 HNRNPA2B1P22626 353 aaKnown RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 OR1E1P30953 314 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 ACTN2P35609 894 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 ETFBP38117 255 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 EIF2S3P41091 472 aaKnown RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 UBASH3AP57075 661 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 SEMG2Q02383 582 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 DEUP1Q05D60 604 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 KCNMA1Q12791 1236 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 MAN2A1Q16706 1144 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 SLC25A52Q3SY17 297 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 PTPN20Q4JDL3 420 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 CDKAL1Q5VV42 579 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 SLC47A2Q86VL8 602 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 HORMAD1Q86X24 394 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 ERICH1Q86X53 443 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 MARCH9Q86YJ5 346 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 FAM71AQ8IYT1 594 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 TMEM145Q8NBT3 493 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 OR2A12Q8NGT7 310 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 C18orf8Q96DM3 657 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 UBL7Q96S82 380 aaPredicted RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 HAPLN3Q96S86 360 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 XPO4Q9C0E2 1151 aaKnown RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 RETREG1Q9H6L5 497 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 PIGVQ9NUD9 493 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 VPS51Q9UID3 782 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 CLCA2Q9UQC9 943 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 GCN1Q92616 2671 aaKnown RBP8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 RP1P56715 2156 aa8.59□□□□□ -1.03
RPUSD4-209ENST00000534393 HELZ2Q9BYK8 2649 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 IGLV3-10A0A075B6K4 115 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 ILVBLA1L0T0 632 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 TK2O00142 265 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SLC31A1O15431 190 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SIGLEC6O43699 453 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 CNTN5O94779 1100 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PCDH8O95206 1070 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 LSM8O95777 96 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 MT-CO1P00395 513 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PTMAP06454 111 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 TPM3P06753 285 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 GLDCP23378 1020 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DGKAP23743 735 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 EEF1GP26641 437 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 CDH5P33151 784 aaPredicted RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 CLCN1P35523 988 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 GABRB2P47870 512 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 NUMBP49757 651 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SULT1E1P49888 294 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DUSP3P51452 185 aaPredicted RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 METAP1P53582 386 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 TAS2R38P59533 333 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 RNASE9P60153 205 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 RPS21P63220 83 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DAB2P98082 770 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 ZNF284Q2VY69 593 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PROX2Q3B8N5 592 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 POM121L1PQ3SYA9 428 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 FILIP1LQ4L180 1135 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 TCP11X2Q5H9J9 407 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 FAM102AQ5T9C2 384 aaPredicted RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PIP5KL1Q5T9C9 394 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 KIAA1161Q6NSJ0 714 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 ERN2Q76MJ5 926 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 ARCQ7LC44 396 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 C14orf80Q86SX3 495 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 IRF2BP1Q8IU81 584 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 LSMEM2Q8N112 164 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PCDH20Q8N6Y1 951 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DCBLD1Q8N8Z6 715 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SPC24Q8NBT2 197 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 LSM14AQ8ND56 463 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 OR52K2Q8NGK3 314 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 OR4C6Q8NH72 309 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SNIP1Q8TAD8 396 aaKnown RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 FGF11Q92914 225 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 MRFAP1L1Q96HT8 127 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 FEM1CQ96JP0 617 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 PDLIM2Q96JY6 352 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 NAP1L5Q96NT1 182 aaPredicted RBP8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DCBLD2Q96PD2 775 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 DUSP23Q9BVJ7 150 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 CEP44Q9C0F1 390 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 NDST4Q9H3R1 872 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 USP29Q9HBJ7 922 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 SIX2Q9NPC8 291 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 NCKIPSDQ9NZQ3 722 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 IL36AQ9UHA7 158 aa8.58□□□□□ -1.04
RPUSD4-209ENST00000534393 LIMA1Q9UHB6 759 aaKnown RBP8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms