RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 ZNF77Q15935 545 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 NTRK3Q16288 839 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 SPDYCQ5MJ68 293 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TTC22Q5TAA0 569 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ATF7IP2Q5U623 682 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 EGFLAMQ63HQ2 1017 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ARMCX5Q6P1M9 558 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TUBA3EQ6PEY2 450 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 FILIP1Q7Z7B0 1213 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 USP37Q86T82 979 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ITIH5Q86UX2 942 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TMPRSS12Q86WS5 348 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ERICH1Q86X53 443 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF575Q86XF7 245 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ZBTB8OSQ8IWT0 167 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 EXOC8Q8IYI6 725 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 BLIDQ8IZY5 108 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF808Q8N4W9 903 aaPredicted RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 AMER2Q8N7J2 671 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 UHMK1Q8TAS1 419 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 DEPTORQ8TB45 409 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ATP2A3Q93084 1043 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 WBP2Q969T9 261 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MED8Q96G25 268 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TMEM176AQ96HP8 235 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MRFAP1L1Q96HT8 127 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 SENP8Q96LD8 212 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 PNKPQ96T60 521 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 CDC6Q99741 560 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ACO2Q99798 780 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ADPGKQ9BRR6 497 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 TCHPQ9BT92 498 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 GPR174Q9BXC1 333 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 NFKBIZQ9BYH8 718 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 HAPLN2Q9GZV7 340 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 OSBPL2Q9H1P3 480 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MMRN2Q9H8L6 949 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ARHGEF4Q9NR80 690 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 ANKEF1Q9NU02 776 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 RIC8BQ9NVN3 520 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 GCNT4Q9P109 453 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 EIF2B4Q9UI10 523 aaKnown RBP3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 MAFFQ9ULX9 164 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 PCDHB1Q9Y5F3 818 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 COL6A6A6NMZ7 2263 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 EML5Q05BV3 1969 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 THADAQ6YHU6 1953 aa3.18□□□□□ -1.9
CHMP4A-208ENST00000534106 VWA8A3KMH1 1905 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ADAMTS9Q9P2N4 1935 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CRYBG3Q68DQ2 2970 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TLN1Q9Y490 2541 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 A0A1B0GTW7 788 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ANO9A1A5B4 782 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 PMS2P1A4D2B8 440 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MEI4A8MW99 385 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 PRRT4C9JH25 899 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 FAM47E-STBD1D6RA91 191 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 hCG_1984214I3L0E3 225 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 BCAT2O15382 392 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 KLK10O43240 276 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 DKC1O60832 514 aaKnown RBP eCLIP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MED24O75448 989 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 CLSTN1O94985 981 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LYPLA2O95372 231 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 FGF19O95750 216 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 APODP05090 189 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 HOXB2P14652 356 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 GNSP15586 552 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ITGB6P18564 788 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 HDCP19113 662 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ACRV1P26436 265 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 HOXD12P35452 270 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MSX2P35548 267 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ETFBP38117 255 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MATKP42679 507 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TNFRSF4P43489 277 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TUFMP49411 452 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LILRA4P59901 499 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 AKAP17AQ02040 695 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 RHDQ02161 417 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 TOP3AQ13472 1001 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 BYSLQ13895 437 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 MYBPC2Q14324 1141 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 ZNF268Q14587 947 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 VEPH1Q14D04 833 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 SHBQ15464 509 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 DCAF4L1Q3SXM0 396 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LINC00303Q3SY05 128 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 PREPLQ4J6C6 727 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 WDR45BQ5MNZ6 344 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 EOGTQ5NDL2 527 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LY6G5CQ5SRR4 150 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 HES3Q5TGS1 186 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 DCAF12L1Q5VU92 463 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 BTBD8Q5XKL5 378 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 WSCD1Q658N2 575 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 LMBRD2Q68DH5 695 aaPredicted RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 KIAA1324Q6UXG2 1013 aaKnown RBP3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 SLC36A4Q6YBV0 504 aa3.17□□□□□ -1.9
CHMP4A-208ENST00000534106 KDM7AQ6ZMT4 941 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms