RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 TRPM8Q7Z2W7 1104 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 PCGF5Q86SE9 256 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 PDCD7Q8N8D1 485 aaKnown RBP9.77□□□□□ -0.85
RTL1-201ENST00000534062 ART4Q93070 314 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 CFAP36Q96G28 342 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 SLC39A8Q9C0K1 460 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 MRPS23Q9Y3D9 190 aaKnown RBP9.77□□□□□ -0.85
RTL1-201ENST00000534062 HBS1LQ9Y450 684 aaKnown RBP9.77□□□□□ -0.85
RTL1-201ENST00000534062 ZFP37Q9Y6Q3 630 aaPredicted RBP9.77□□□□□ -0.85
RTL1-201ENST00000534062 CHD7Q9P2D1 2997 aa9.77□□□□□ -0.85
RTL1-201ENST00000534062 HSFX4A0A1B0GTS1 333 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 CCDC195A0A1B0GUA6 201 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 EXOC1LA0A1B0GW35 172 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 HSFX3A0A1B0GWH4 333 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 RASGRF2O14827 1237 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 IGLV3-25P01717 112 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 GNAZP19086 355 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 PSMB4P28070 264 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 DRG2P55039 364 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 SLC29A2Q14542 456 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 POLD3Q15054 466 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 RABGAP1LQ5R372 815 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 GAREM2Q75VX8 874 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 SMG7Q92540 1137 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 SLCO2A1Q92959 643 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 TCEAL4Q96EI5 215 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ZNF317Q96PQ6 595 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 QKIQ96PU8 341 aaKnown RBP eCLIP9.76□□□□□ -0.85
RTL1-201ENST00000534062 IL37Q9NZH6 218 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 NOVA2Q9UNW9 492 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 TRIM33Q9UPN9 1127 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 CHMP2BQ9UQN3 213 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 HCFC2Q9Y5Z7 792 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 TCRBV7S3A2A0A539 114 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 FAM92AA1XBS5 289 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 CCDC78A2IDD5 438 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ARHGAP42A6NI28 874 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 AVILO75366 819 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 STC2O76061 302 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ECHS1P30084 290 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 PDE1BQ01064 536 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ZNF177Q13360 481 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 DYNC1I2Q13409 638 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 TEAD2Q15562 447 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 CFAP157Q5JU67 520 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 NLRC5Q86WI3 1866 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 UCMAQ8WVF2 138 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 CPT1BQ92523 772 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 CDC42EP4Q9H3Q1 356 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 ZDHHC18Q9NUE0 388 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 IPO11Q9UI26 975 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 FNDC3AQ9Y2H6 1198 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 CDH23Q9H251 3354 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ZNF638Q14966 1978 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 PTPRDP23468 1912 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 BCLAF3A2AJT9 711 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 SHBGP04278 402 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 RB1P06400 928 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 PTPN2P17706 415 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 GARSP41250 739 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 IFNAR2P48551 515 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 MAGOHP61326 146 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 CDH18Q13634 790 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 MORF4L2Q15014 288 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 TMED2Q15363 201 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 PCSK7Q16549 785 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ADGRD2Q7Z7M1 963 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 RTL3Q8N8U3 475 aaKnown RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 SP7Q8TDD2 431 aaPredicted RBP9.76□□□□□ -0.85
RTL1-201ENST00000534062 SLC39A13Q96H72 371 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 ECT2Q9H8V3 914 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 USP29Q9HBJ7 922 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 RBM22Q9NW64 420 aaKnown RBP eCLIP9.76□□□□□ -0.85
RTL1-201ENST00000534062 RHBDL2Q9NX52 303 aa9.76□□□□□ -0.85
RTL1-201ENST00000534062 A0A0A0MRY4 1105 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 CBX4O00257 560 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 METTL18O95568 372 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 EFEMP2O95967 443 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 RHOP08100 348 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 HSPA9P38646 679 aaKnown RBP9.75□□□□□ -0.85
RTL1-201ENST00000534062 MSH2P43246 934 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 MAGEA4P43358 317 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 ZNF135P52742 658 aaPredicted RBP9.75□□□□□ -0.85
RTL1-201ENST00000534062 PAFAH1B3Q15102 231 aaKnown RBP9.75□□□□□ -0.85
RTL1-201ENST00000534062 GEN1Q17RS7 908 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 BNIPLQ7Z465 357 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 PIGWQ7Z7B1 504 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 PPP2R3CQ969Q6 453 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 SLC35B4Q969S0 331 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 TMA16Q96EY4 203 aaKnown RBP9.75□□□□□ -0.85
RTL1-201ENST00000534062 SPATA13Q96N96 652 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 ATXN10Q9UBB4 475 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 HACD1B0YJ81 288 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 NCAM2O15394 837 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 TBL1XO60907 577 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 LILRB3O75022 631 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 PMPCBO75439 489 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 PIAS1O75925 651 aa9.75□□□□□ -0.85
RTL1-201ENST00000534062 RHOCP08134 193 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms