RNA–Protein interactions for RNA: ENST00000533682.1

CLP1-205, Transcript of cleavage and polyadenylation factor I subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLP1, Length 2,435 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLP1-205ENST00000533682 USP1O94782 785 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 RTN3O95197 1032 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 ACVRL1P37023 503 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ETFBP38117 255 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 PRMT2P55345 433 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ITKQ08881 620 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 BST1Q10588 318 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 PRPSAP1Q14558 356 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 NAA25Q14CX7 972 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 CHI3L2Q15782 390 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 N4BP2L1Q5TBK1 243 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 NAPEPLDQ6IQ20 393 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ESRP1Q6NXG1 681 aaKnown RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 TIFABQ6ZNK6 161 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 KCNMB4Q86W47 210 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ARHGAP18Q8N392 663 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 SLC25A41Q8N5S1 370 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 MAB21L3Q8N8X9 362 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ZNF784Q8NCA9 323 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 MRGPRX2Q96LB1 330 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 FCRL5Q96RD9 977 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 CLSTN3Q9BQT9 956 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 IL22Q9GZX6 179 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ECT2Q9H8V3 914 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ACTR5Q9H9F9 607 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ETAA1Q9NY74 926 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 TXNDC16Q9P2K2 825 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ATP11BQ9Y2G3 1177 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 CHD9Q3L8U1 2897 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 FAM237BA0A1B0GVD1 139 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 PRKCGP05129 697 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 SLC2A3P11169 496 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ITGB8P26012 769 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 TYK2P29597 1187 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 SLC8A1P32418 973 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 GCKP35557 465 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 GP5P40197 560 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 NPY2RP49146 381 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 NCALDP61601 193 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 KCNJ2P63252 427 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ZNF33AQ06730 810 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 BNIP1Q12981 228 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ATG14Q6ZNE5 492 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ANKRD33Q7Z3H0 272 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 TBC1D1Q86TI0 1168 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 TNS4Q8IZW8 715 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 UMODL1-AS1Q8N2C9 162 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 LRRC43Q8N309 656 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 OR52K2Q8NGK3 314 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 PRR11Q96HE9 360 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 SPATA17Q96L03 361 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 GKN1Q9NS71 199 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 ZNF212Q9UDV6 495 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 MARCOQ9UEW3 520 aaPredicted RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 SOX13Q9UN79 622 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 DOCK6Q96HP0 2047 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 REV3LO60673 3130 aa12.13□□□□□ -0.47
CLP1-205ENST00000533682 PRRC2BQ5JSZ5 2229 aaKnown RBP12.13□□□□□ -0.47
CLP1-205ENST00000533682 A0A0D9SEW6 157 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 IGLV3-27P01718 113 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 KITP10721 976 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 RHOQP17081 205 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 SAT1P21673 171 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 SLC6A4P31645 630 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ADRA1AP35348 466 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 RPL10AP62906 217 aaKnown RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 TMPRSS15P98073 1019 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 IRF9Q00978 393 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 NRG1Q02297 640 aaPredicted RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 DSC2Q02487 901 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 KIAA1841Q6NSI8 718 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 CYB5D1Q6P9G0 228 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 MTDHQ86UE4 582 aaKnown RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 NUDCD3Q8IVD9 361 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 DENND6AQ8IWF6 608 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ATP6V0D2Q8N8Y2 350 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ZNF512Q96ME7 567 aaPredicted RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 LRRC37BQ96QE4 947 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 TMEM175Q9BSA9 504 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 SNX15Q9NRS6 342 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 TMEM248Q9NWD8 314 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 TMEM216Q9P0N5 145 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 AAR2Q9Y312 384 aaKnown RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 USH1CQ9Y6N9 552 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 TANC1Q9C0D5 1861 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 IGLV3-10A0A075B6K4 115 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 WASH4PA8MWX3 477 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 H7C4K7 107 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 HOXA2O43364 376 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 VAPBO95292 243 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ZDHHC11BP0C7U3 371 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ARNTP27540 789 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 GABRB3P28472 473 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 OR1E1P30953 314 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 CD86P42081 329 aa12.12□□□□□ -0.47
CLP1-205ENST00000533682 ELAVL2Q12926 359 aaKnown RBP12.12□□□□□ -0.47
CLP1-205ENST00000533682 CTBP1Q13363 440 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms