RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 KCNV2Q8TDN2 545 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 USP33Q8TEY7 942 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 FRS2Q8WU20 508 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 NSMCE1Q8WV22 266 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 HTR3CQ8WXA8 447 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 CASKIN2Q8WXE0 1202 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF419Q96HQ0 510 aaPredicted RBP12.13□□□□□ -0.47
COMMD9-208ENST00000533643 ACOX2Q99424 681 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 NELL2Q99435 816 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 IL12RB2Q99665 862 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 TMEM121Q9BTD3 319 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 CEP41Q9BYV8 373 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 LMAN1LQ9HAT1 526 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 ZDHHC4Q9NPG8 344 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF148Q9UQR1 794 aa12.13□□□□□ -0.47
COMMD9-208ENST00000533643 TTC28Q96AY4 2481 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 CFAP69A5D8W1 941 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 TTC34A8MYJ7 566 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 WASH3PC4AMC7 463 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 RNF103O00237 685 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MUSKO15146 869 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 KCNN4O15554 427 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MTSS1O43312 755 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 RNF40O75150 1001 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 PTPN3P26045 913 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 IL12RB1P42701 662 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MMP13P45452 471 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 RENBPP51606 427 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 NRLP54845 237 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 GDF10P55107 478 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ST8SIA6P61647 398 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MRPS21P82921 87 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 CKAP4Q07065 602 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ENPP2Q13822 863 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 UBXN2BQ14CS0 331 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 DLG2Q15700 870 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 FBXO43Q4G163 708 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 C2orf27AQ580R0 203 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MARC1Q5VT66 337 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 HEATR6Q6AI08 1181 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 TRIM67Q6ZTA4 783 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 METTL3Q86U44 580 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 PGBD5Q8N414 524 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ALLCQ8N6M5 410 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 CNTD1Q8N815 330 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF513Q8N8E2 541 aaPredicted RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 IL17RCQ8NAC3 791 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ATL2Q8NHH9 583 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 ISG20Q96AZ6 181 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 DDX47Q9H0S4 455 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 TMEM245Q9H330 911 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 MTG2Q9H4K7 406 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 NT5MQ9NPB1 228 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 RBM22Q9NW64 420 aaKnown RBP eCLIP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 CACNA2D2Q9NY47 1150 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 LHX3Q9UBR4 397 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 SEPT3Q9UH03 358 aa12.12□□□□□ -0.47
COMMD9-208ENST00000533643 FCF1Q9Y324 198 aaKnown RBP12.12□□□□□ -0.47
COMMD9-208ENST00000533643 C5orf60A6NFR6 353 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC188H7C350 402 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 NPC1O15118 1278 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ADAM23O75077 832 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 GCATO75600 419 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF189O75820 626 aaPredicted RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 KLF8O95600 359 aaPredicted RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 PDGFBP01127 241 aaPredicted RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ALADP13716 330 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 HLA-EP13747 358 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 PRKCHP24723 683 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 NTSR1P30989 418 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 STIP1P31948 543 aaKnown RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CHRNA3P32297 505 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 NNMTP40261 264 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 WASP42768 502 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 RGRP47804 291 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 FNTAP49354 379 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 LRRC32Q14392 662 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF235Q14590 738 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 E2F5Q15329 346 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 HNRNPA1L2Q32P51 320 aaKnown RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ACCSLQ4AC99 568 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 TEX44Q53QW1 395 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 C22orf39Q6P5X5 142 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC137Q6PK04 289 aaKnown RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 SERPINA13PQ6UXR4 307 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 KLHL7Q8IXQ5 586 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF567Q8N184 647 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 SYNPOQ8N3V7 929 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 ZNF366Q8N895 744 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 TSEN2Q8NCE0 465 aaKnown RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 PJA1Q8NG27 643 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CCDC26Q8TAB7 109 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 RTP4Q96DX8 246 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 TEKT5Q96M29 485 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 AGAP3Q96P47 875 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 PSKH2Q96QS6 385 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CINPQ9BW66 212 aaPredicted RBP12.11□□□□□ -0.47
COMMD9-208ENST00000533643 OSBPL6Q9BZF3 934 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 CEP44Q9C0F1 390 aa12.11□□□□□ -0.47
COMMD9-208ENST00000533643 TNKS2Q9H2K2 1166 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms