RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 HOXA11P31270 313 aaPredicted RBP16.89■□□□□ 0.29
CTSB-228ENST00000533455 HCAR3P49019 387 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 SCAPQ12770 1279 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 ADRM1Q16186 407 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 ITPRIPL1Q6GPH6 555 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 SLC27A1Q6PCB7 646 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 ZNF560Q96MR9 790 aa16.89■□□□□ 0.29
CTSB-228ENST00000533455 G3BP2Q9UN86 482 aaKnown RBP16.89■□□□□ 0.29
CTSB-228ENST00000533455 SHROOM3Q8TF72 1996 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 TRIM38O00635 465 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 CFLARO15519 480 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 HSPA1AP0DMV8 641 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 HSPA1BP0DMV9 641 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 DNAJB2P25686 324 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 PSMD8P48556 350 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 CDKL1Q00532 357 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 ART3Q13508 389 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 MYLK3Q32MK0 819 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 TMEM198Q66K66 360 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 KCTD13Q8WZ19 329 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 USP13Q92995 863 aaPredicted RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 HDAC11Q96DB2 347 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 MOCOSQ96EN8 888 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 MAELQ96JY0 434 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 KLHL32Q96NJ5 620 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 HNRNPABQ99729 332 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 DUSP16Q9BY84 665 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 SENP6Q9GZR1 1112 aaPredicted RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 PIGVQ9NUD9 493 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 UTP6Q9NYH9 597 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 RBPJLQ9UBG7 517 aa16.88■□□□□ 0.29
CTSB-228ENST00000533455 COPG1Q9Y678 874 aaKnown RBP16.88■□□□□ 0.29
CTSB-228ENST00000533455 SYNJ2BP-COX16A0A087WUM0 186 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 TCAF2A6NFQ2 919 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 UNCXA6NJT0 531 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 ASB14A6NK59 587 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 AP3B1O00203 1094 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SPTLC1O15269 473 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 VAPBO95292 243 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SLC35E2BP0CK96 405 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 ADRA1BP35368 520 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 NAGLUP54802 743 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SLC12A1Q13621 1099 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 Q3C1V9 767 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 GLRA4Q5JXX5 417 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SH2D4BQ5SQS7 431 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 LRRC8EQ6NSJ5 796 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 PPTC7Q8NI37 304 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SLC16A10Q8TF71 515 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 TNIP3Q96KP6 325 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 PPP1R36Q96LQ0 422 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 VAT1Q99536 393 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 KIFC1Q9BW19 673 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 GRIP2Q9C0E4 1043 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 CHRAC1Q9NRG0 131 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 COX16Q9P0S2 106 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 FAM72CH0Y354 149 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 NPHS1O60500 1241 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 CD4P01730 458 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 JUNP05412 331 aaKnown RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 NFKB1P19838 968 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 NMBRP28336 390 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 POLD2P49005 469 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 NR1H2P55055 460 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 GK3PQ14409 553 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 USP10Q14694 798 aaKnown RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 PPP2R5DQ14738 602 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 GJC2Q5T442 439 aaPredicted RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 C6orf52Q5T4I8 152 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 ZNF618Q5T7W0 954 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 FAM72AQ5TYM5 149 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SYPL2Q5VXT5 272 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 FAM72DQ6L9T8 149 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 FAM72BQ86X60 149 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 KLHDC8BQ8IXV7 354 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 CENPLQ8N0S6 344 aaPredicted RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 FSTL5Q8N475 847 aaPredicted RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 KDM1BQ8NB78 822 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 ZFP28Q8NHY6 868 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 ADAM32Q8TC27 787 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 KCTD4Q8WVF5 259 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 SCYL1Q96KG9 808 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 C16orf70Q9BSU1 422 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 EIF2AQ9BY44 585 aaKnown RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 LRRC4Q9HBW1 653 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 APPL1Q9UKG1 709 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 RUVBL2Q9Y230 463 aaKnown RBP16.87■□□□□ 0.29
CTSB-228ENST00000533455 CSADQ9Y600 493 aa16.87■□□□□ 0.29
CTSB-228ENST00000533455 TANC1Q9C0D5 1861 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ARHGAP10A1A4S6 786 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 PHGDHO43175 533 aaKnown RBP16.86■□□□□ 0.29
CTSB-228ENST00000533455 C8BP07358 591 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ZNF286BP0CG31 522 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 PNPLA4P41247 253 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 TPI1P60174 286 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 GALNT2Q10471 571 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 ZBTB17Q13105 803 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 NME3Q13232 169 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 MARCH8Q5T0T0 291 aa16.86■□□□□ 0.29
CTSB-228ENST00000533455 NXNQ6DKJ4 435 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms