RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 PLPP6Q8IY26 295 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 DNASE2BQ8WZ79 361 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 HSPH1Q92598 858 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 PIGKQ92643 395 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 SMOC1Q9H4F8 434 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 PCDH18Q9HCL0 1135 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 NCKAP1Q9Y2A7 1128 aa20.86■□□□□ 0.93
CCS-208ENST00000533244 FCF1Q9Y324 198 aaKnown RBP20.86■□□□□ 0.93
CCS-208ENST00000533244 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.86■□□□□ 0.93
CCS-208ENST00000533244 A0A1W2PP55 124 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 METTL12A8MUP2 240 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 H3BRJ5 948 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 SEMA4FO95754 770 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 ARSEP51690 589 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 METAP1P53582 386 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 HADHQ16836 314 aaKnown RBP20.85■□□□□ 0.93
CCS-208ENST00000533244 FAM46CQ5VWP2 391 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 DPY19L3Q6ZPD9 716 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 NPWQ8N729 165 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 PIP4K2CQ8TBX8 421 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 CSPG4P5Q96PW8 444 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 NEUROG2Q9H2A3 272 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 TNKS2Q9H2K2 1166 aa20.85■□□□□ 0.93
CCS-208ENST00000533244 EVLQ9UI08 416 aaPredicted RBP20.85■□□□□ 0.93
CCS-208ENST00000533244 SPTBN4Q9H254 2564 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 C1QTNF3-AMACRE9PGA6 284 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 DAPK3O43293 454 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 CHRNA3P32297 505 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 ARL4AP40617 200 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 ARHGAP25P42331 645 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 TAS2R40P59535 323 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 INO80DQ53TQ3 878 aaPredicted RBP20.84■□□□□ 0.93
CCS-208ENST00000533244 HDDC3Q8N4P3 179 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 CHST14Q8NCH0 376 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 TMIEQ8NEW7 156 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 CASKIN2Q8WXE0 1202 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 OMDQ99983 421 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 SLC39A8Q9C0K1 460 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 C6orf106Q9H6K1 298 aaPredicted RBP20.84■□□□□ 0.93
CCS-208ENST00000533244 PDFQ9HBH1 243 aa20.84■□□□□ 0.93
CCS-208ENST00000533244 RCOR3Q9P2K3 495 aaPredicted RBP20.84■□□□□ 0.93
CCS-208ENST00000533244 FARP1Q9Y4F1 1045 aaPredicted RBP20.84■□□□□ 0.93
CCS-208ENST00000533244 ATXN2Q99700 1313 aaKnown RBP20.84■□□□□ 0.93
CCS-208ENST00000533244 PATE3B3GLJ2 98 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 BNIP3LO60238 219 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 RNASEH2AO75792 299 aaKnown RBP20.83■□□□□ 0.93
CCS-208ENST00000533244 IL4RP24394 825 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 MAGEA1P43355 309 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 CARD16Q5EG05 197 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 WDR45BQ5MNZ6 344 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 SYCP2LQ5T4T6 812 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 DCAF12L1Q5VU92 463 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 TCEAL6Q6IPX3 200 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 TMTC1Q8IUR5 882 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 LZTR1Q8N653 840 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 TCEAL3Q969E4 200 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 VOPP1Q96AW1 172 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 CELF6Q96J87 481 aaKnown RBP20.83■□□□□ 0.93
CCS-208ENST00000533244 IMPACTQ9P2X3 320 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 ZBTB32Q9Y2Y4 487 aaPredicted RBP20.83■□□□□ 0.93
CCS-208ENST00000533244 WASF2Q9Y6W5 498 aa20.83■□□□□ 0.93
CCS-208ENST00000533244 PRR5-ARHGAP8B1AHC4 643 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 RNF103O00237 685 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 SLC7A4O43246 635 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 BUB1O43683 1085 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 PRAMEF11O60813 436 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 GSRP00390 522 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 PRNPP04156 253 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 CYLC1P35663 651 aaPredicted RBP20.82■□□□□ 0.92
CCS-208ENST00000533244 RECQLP46063 649 aaPredicted RBP20.82■□□□□ 0.92
CCS-208ENST00000533244 HADHBP55084 474 aaKnown RBP20.82■□□□□ 0.92
CCS-208ENST00000533244 ARHGAP8P85298 464 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 MESDQ14696 234 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 SLC23A3Q6PIS1 610 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 LEKR1Q6ZMV7 388 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 GANCQ8TET4 914 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 ETNK2Q9NVF9 386 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 IL36AQ9UHA7 158 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 LAMA1P25391 3075 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 PI4KAP42356 2102 aa20.82■□□□□ 0.92
CCS-208ENST00000533244 ARHGAP42A6NI28 874 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 SOWAHDA6NJG2 315 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 MEI4A8MW99 385 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 KHNYNO15037 678 aaKnown RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 TMCC1O94876 653 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 CD48P09326 243 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 AMPD1P23109 780 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 SSR1P43307 286 aaKnown RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 PAPOLAP51003 745 aaKnown RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 CCNHP51946 323 aaPredicted RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 ADPRHP54922 357 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 CDH6P55285 790 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 ATP13A4Q4VNC1 1196 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 AGBL4Q5VU57 503 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 RABEPKQ7Z6M1 372 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 ZNF354CQ86Y25 554 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 TMEM139Q8IV31 216 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 C12orf50Q8NA57 414 aaPredicted RBP20.81■□□□□ 0.92
CCS-208ENST00000533244 OR2AP1Q8NGE2 309 aa20.81■□□□□ 0.92
CCS-208ENST00000533244 OR2T34Q8NGX1 318 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms