RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 PCDHGC3Q9UN70 934 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 DUSP10Q9Y6W6 482 aa11.65□□□□□ -0.54
TRAPPC4-213ENST00000533149 ENO4A6NNW6 628 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 O00370 1275 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 TRIM38O00635 465 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 WNT9AO14904 365 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 ITGB2P05107 769 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 GP1BAP07359 652 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 DLDP09622 509 aaKnown RBP11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 HLA-FP30511 346 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 C4orf17Q53FE4 359 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 LCLAT1Q6UWP7 414 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 CHST9Q7L1S5 443 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 IQCHQ86VS3 1027 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 PASD1Q8IV76 773 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 AHI1Q8N157 1196 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 WDTC1Q8N5D0 677 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 TMEM35BQ8NCS4 154 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 CCNL2Q96S94 520 aaPredicted RBP11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 OMDQ99983 421 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 TSGA10Q9BZW7 698 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 NEUROG2Q9H2A3 272 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 EVA1BQ9NVM1 165 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 CLIC5Q9NZA1 410 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 GUCA1BQ9UMX6 200 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 SATB2Q9UPW6 733 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 PAXBP1Q9Y5B6 917 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 DOPEY2Q9Y3R5 2298 aa11.64□□□□□ -0.55
TRAPPC4-213ENST00000533149 A0A1W2PP55 124 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 ANKRD62A6NC57 917 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 KRT86O43790 486 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 LZTS3O60299 673 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 SDC3O75056 442 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 RNASEH2AO75792 299 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 HMBSP08397 361 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 TMEM253P0C7T8 217 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 FAM200BP0CF97 657 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 CKMT1AP12532 417 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 MYF5P13349 255 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 CCDC130P13994 396 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 NOMO3P69849 1222 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 STILQ15468 1287 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 LINC00303Q3SY05 128 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 PPP1R26Q5T8A7 1209 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 ARHGAP17Q68EM7 881 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 NAPEPLDQ6IQ20 393 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 NYAP1Q6ZVC0 841 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 ADIPOR2Q86V24 386 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 SPATS2Q86XZ4 545 aaKnown RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 FAM217AQ8IXS0 508 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 OR4C6Q8NH72 309 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 UBA3Q8TBC4 463 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 SEMA3CQ99985 751 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 IRX2Q9BZI1 471 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 PNPLA8Q9NP80 782 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 RRAGDQ9NQL2 400 aaPredicted RBP11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 FAM49BQ9NUQ9 324 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 TJP2Q9UDY2 1190 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 RASAL2Q9UJF2 1139 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 SALL4Q9UJQ4 1053 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 PCDHGA8Q9Y5G5 932 aa11.63□□□□□ -0.55
TRAPPC4-213ENST00000533149 BTNL10A8MVZ5 291 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 C10orf142B7Z368 130 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 LSM8O95777 96 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 TNNT1P13805 278 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ITGB6P18564 788 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 POLR2EP19388 210 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CR2P20023 1033 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 HOXD9P28356 352 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CDH5P33151 784 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 NUDT1P36639 197 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 MLLT3P42568 568 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 NSFP46459 744 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 DUSP3P51452 185 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 NAP1L1P55209 391 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ST8SIA6P61647 398 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 GNG11P61952 73 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 NFKB2Q00653 900 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CENPCQ03188 943 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 EFEMP1Q12805 493 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CLN3Q13286 438 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CST6Q15828 149 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ISXQ2M1V0 245 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 GOLGA7BQ2TAP0 167 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 C3orf38Q5JPI3 329 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ZNF569Q5MCW4 686 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 MBLAC2Q68D91 279 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 PPP1R2P3Q6NXS1 205 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 USP53Q70EK8 1073 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 SND1Q7KZF4 910 aaKnown RBP eCLIP11.62□□□□□ -0.553e-8■■□□□ 12.3
TRAPPC4-213ENST00000533149 GPRIN1Q7Z2K8 1008 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 KIAA0907Q7Z7F0 614 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 PHF13Q86YI8 300 aaPredicted RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 MCOLN2Q8IZK6 566 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 SLC25A45Q8N413 288 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 ARL14Q8N4G2 192 aa11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 C1orf131Q8NDD1 294 aaKnown RBP11.62□□□□□ -0.55
TRAPPC4-213ENST00000533149 CTNNBL1Q8WYA6 563 aaPredicted RBP11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms