RNA–Protein interactions for RNA: ENST00000532088.1

COPB1-208, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 3

Gene COPB1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-208ENST00000532088 IL31Q6EBC2 164 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 RETSATQ6NUM9 610 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 TPRG1Q6ZUI0 275 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 APCDD1Q8J025 514 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 SYNPOQ8N3V7 929 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ATPAF2Q8N5M1 289 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 OR7D4Q8NG98 312 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 TTC8Q8TAM2 541 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 SLC35B2Q8TB61 432 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ACTL9Q8TC94 416 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 FAM3CQ92520 227 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 HAUS1Q96CS2 278 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 CELF6Q96J87 481 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 OSBPL6Q9BZF3 934 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ATP13A1Q9HD20 1204 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 CD320Q9NPF0 282 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 ELOVL2Q9NXB9 296 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 IPO11Q9UI26 975 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 MUTYHQ9UIF7 546 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 CDC23Q9UJX2 597 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 MFHAS1Q9Y4C4 1052 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 HEY1Q9Y5J3 304 aa12.77□□□□□ -0.37
COPB1-208ENST00000532088 TCF20Q9UGU0 1960 aaKnown RBP12.77□□□□□ -0.37
COPB1-208ENST00000532088 GOLGA6L10A0A0M3HER8 536 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 BCLAF3A2AJT9 711 aaKnown RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 TBC1D3BA6NDS4 549 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 DFFAO00273 331 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 ZNF185O15231 689 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 DLDP09622 509 aaKnown RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 HNRNPLP14866 589 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPB1-208ENST00000532088 PECAM1P16284 738 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 ACVRL1P37023 503 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 ECT2LQ008S8 904 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 CKAP4Q07065 602 aaKnown RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 DHX9Q08211 1270 aaKnown RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 SIGLEC14Q08ET2 396 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 PRKD1Q15139 912 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 CYP1B1Q16678 543 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 INO80DQ53TQ3 878 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 SLC45A4Q5BKX6 768 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 DGKKQ5KSL6 1271 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 TMEM215Q68D42 235 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 TXNDC11Q6PKC3 985 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 ZNF572Q7Z3I7 529 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 CDKL3Q8IVW4 592 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 CCDC116Q8IYX3 515 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 C12orf50Q8NA57 414 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 MAML1Q92585 1016 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 NKD2Q969F2 451 aaPredicted RBP12.76□□□□□ -0.37
COPB1-208ENST00000532088 QKIQ96PU8 341 aaKnown RBP eCLIP12.76□□□□□ -0.37
COPB1-208ENST00000532088 FERMT1Q9BQL6 677 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 SP110Q9HB58 689 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 PDFQ9HBH1 243 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 HAUS2Q9NVX0 235 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 AMACRQ9UHK6 382 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 VPS51Q9UID3 782 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 SLC25A13Q9UJS0 675 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 FBXL21Q9UKT6 434 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 HS3ST2Q9Y278 367 aa12.76□□□□□ -0.37
COPB1-208ENST00000532088 TCRBV7S2A1N4TA0A589 114 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 KANSL1LA0AUZ9 987 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 CFAP69A5D8W1 941 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 KRBA1A5PL33 1030 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 PRRT4C9JH25 899 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 CCDC188H7C350 402 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 TRIM24O15164 1050 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 MATN3O15232 486 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 DCXO43602 365 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 LIASO43766 372 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 NNMTP40261 264 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 SERPINH1P50454 418 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 MRPS21P82921 87 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 ARF5P84085 180 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 KDSRQ06136 332 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 ENPP2Q13822 863 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 CCINQ13939 588 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 HNRNPDQ14103 355 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 PON2Q15165 354 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 LLGL1Q15334 1064 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 WHAMMP3Q1A5X7 153 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 FSTL4Q6MZW2 842 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 NPNTQ6UXI9 565 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 TRMT11Q7Z4G4 463 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 CCDC13Q8IYE1 715 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 NSMCE1Q8WV22 266 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 TFB1MQ8WVM0 346 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 EDAQ92838 391 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 ISG20Q96AZ6 181 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 MS4A14Q96JA4 679 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 RUNDC3BQ96NL0 473 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 UCN2Q96RP3 112 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 VAT1Q99536 393 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 SPON2Q9BUD6 331 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 CEP44Q9C0F1 390 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 THAP10Q9P2Z0 257 aaPredicted RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 DRG1Q9Y295 367 aaKnown RBP12.75□□□□□ -0.37
COPB1-208ENST00000532088 MRFAP1Q9Y605 127 aa12.75□□□□□ -0.37
COPB1-208ENST00000532088 FAM187AA6NFU0 413 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 K7EQS6 105 aa12.74□□□□□ -0.37
COPB1-208ENST00000532088 CBX4O00257 560 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms