RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 ECT2LQ008S8 904 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 FZD2Q14332 565 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 ZNF284Q2VY69 593 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 FSCBQ5H9T9 825 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 PIP5KL1Q5T9C9 394 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 FAM46CQ5VWP2 391 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 NADSYN1Q6IA69 706 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 EPM2AIP1Q7L775 607 aaPredicted RBP8.46□□□□□ -1.06
CD44-232ENST00000531118 PIGZQ86VD9 579 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 HORMAD1Q86X24 394 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 DTX1Q86Y01 620 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 CCDC65Q8IXS2 484 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 LMX1AQ8TE12 382 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 SSC4DQ8WTU2 575 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 FRS2Q8WU20 508 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 OR8D1Q8WZ84 308 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 PPP1R13BQ96KQ4 1090 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 RPL10LQ96L21 214 aaKnown RBP8.46□□□□□ -1.06
CD44-232ENST00000531118 SLC12A9Q9BXP2 914 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 ULBP1Q9BZM6 244 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 FOXP3Q9BZS1 431 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 CCDC39Q9UFE4 941 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 AKAP9Q99996 3911 aa8.46□□□□□ -1.06
CD44-232ENST00000531118 TPP1O14773 563 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 SPINT1O43278 529 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 ACSL4O60488 711 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 LUC7L3O95232 432 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 ZBED1O96006 694 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 ASS1P00966 412 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 C4BPAP04003 597 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 BMP2P12643 396 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 CD58P19256 250 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 ETV5P41161 510 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 PIK3CAP42336 1068 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 NUMBP49757 651 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 TKTL1P51854 596 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 AP3M2P53677 418 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 OXCT1P55809 520 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 RELBQ01201 579 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 TPRG1LQ5T0D9 272 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 RRAGBQ5VZM2 374 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 NUGGCQ68CJ6 796 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 Q6ZSR6 202 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 NELFCDQ8IXH7 590 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 C12orf56Q8IXR9 622 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 APCDD1Q8J025 514 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 RBFAQ8N0V3 343 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 PARD3BQ8TEW8 1205 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 RNF139Q8WU17 664 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 NDRG1Q92597 394 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 EDEM1Q92611 657 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 TAF4BQ92750 862 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 GFM1Q96RP9 751 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 IL12RB2Q99665 862 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 ZNF768Q9H5H4 540 aaKnown RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 ZNF71Q9NQZ8 489 aaPredicted RBP8.45□□□□□ -1.06
CD44-232ENST00000531118 KLF15Q9UIH9 416 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 OTOGQ6ZRI0 2925 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 CRYBG3Q68DQ2 2970 aa8.45□□□□□ -1.06
CD44-232ENST00000531118 CELSR2Q9HCU4 2923 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 SPTY2D1-AS1A0A0U1RR47 76 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 A0A1W2PQ27 194 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 A0A1W2PQ64 194 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 A0A1W2PQC6 194 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 C9orf172C9J069 976 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 TMX2-CTNND1H3BSU7 103 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 ALOX15BO15296 676 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 RPLP0P05388 317 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 ELAVL4P26378 380 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 CD82P27701 267 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 DCTP40126 519 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 TXLNAP40222 546 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 STAT6P42226 847 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 SLC11A2P49281 568 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 ATP1A2P50993 1020 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 CLDN10P78369 228 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 ADIGQ0VDE8 80 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 SGSM1Q2NKQ1 1148 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 ZACNQ401N2 412 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 FAM26FQ5R3K3 315 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 FHL5Q5TD97 284 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 SEL1L3Q68CR1 1132 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 PM20D1Q6GTS8 502 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 MSANTD2Q6P1R3 559 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 DCP2Q8IU60 420 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 CCDC117Q8IWD4 279 aaPredicted RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 DEPDC4Q8N2C3 294 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 SDR16C5Q8N3Y7 309 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 KYQ8NBH2 561 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 CCDC74AQ96AQ1 378 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 ZSCAN31Q96LW9 406 aaPredicted RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 LRRC61Q9BV99 259 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 NIF3L1Q9GZT8 377 aa8.44□□□□□ -1.06
CD44-232ENST00000531118 NUCKS1Q9H1E3 243 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 TCEAL2Q9H3H9 227 aaPredicted RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 APOBEC3GQ9HC16 384 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 APOBEC3BQ9UH17 382 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 ZFR2Q9UPR6 939 aaKnown RBP8.44□□□□□ -1.06
CD44-232ENST00000531118 MTORP42345 2549 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms