RNA–Protein interactions for RNA: ENST00000531104.1

SRPRA-205, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 542 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-205ENST00000531104 USP12O75317 370 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 PIAS1O75925 651 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 PAPLNO95428 1278 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 MT-CYBP00156 380 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 POU2F2P09086 479 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 HDCP19113 662 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 SMAD3P84022 425 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 SLC18A2Q05940 514 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 DMTNQ08495 405 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 MSLNQ13421 630 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 IHHQ14623 411 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 LBRQ14739 615 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 SLC14A2Q15849 920 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 ANKRD20A4Q4UJ75 823 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 CERCAMQ5T4B2 595 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 TMCO4Q5TGY1 634 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 PLPP4Q5VZY2 271 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 CXorf57Q6NSI4 855 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 TIFABQ6ZNK6 161 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 HTR3DQ70Z44 454 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 MRPS31Q92665 395 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 ZNF317Q96PQ6 595 aaPredicted RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 IL22Q9GZX6 179 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 MRM3Q9HC36 420 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 VPS45Q9NRW7 570 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 INTS9Q9NV88 658 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 PIH1D1Q9NWS0 290 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 UBP1Q9NZI7 540 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 SMG5Q9UPR3 1016 aaKnown RBP11.1□□□□□ -0.63
SRPRA-205ENST00000531104 CPQQ9Y646 472 aa11.1□□□□□ -0.63
SRPRA-205ENST00000531104 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 A0A0D9SEW6 157 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 HMX2A2RU54 273 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 GMNCA6NCL1 334 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 FAM47DPA6NHR8 397 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 GRM6O15303 877 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 CLASP2O75122 1294 aaKnown RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 MOSPD3O75425 235 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 FGF19O95750 216 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 POLBP06746 335 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 INHBAP08476 426 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SNRPAP09012 282 aaKnown RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 IRF1P10914 325 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 KRT15P19012 456 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 DDX6P26196 483 aaKnown RBP eCLIP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 CCNFP41002 786 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SERPINB9P50453 376 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 WNT3AP56704 352 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 CYP4F8P98187 520 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 MGAT5Q09328 741 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 ZNF177Q13360 481 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 RFTN1Q14699 578 aaPredicted RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 PPM1LQ5SGD2 360 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 PDE12Q6L8Q7 609 aaKnown RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 ELMOD1Q8N336 334 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 CPXM2Q8N436 756 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 PPM1NQ8N819 430 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 BANPQ8N9N5 519 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 DNAAF3Q8N9W5 541 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 OR7D4Q8NG98 312 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 NSMCE1Q8WV22 266 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 PTCD2Q8WV60 388 aaKnown RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 CKAP2Q8WWK9 683 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 ALKBH8Q96BT7 664 aaKnown RBP11.09□□□□□ -0.63
SRPRA-205ENST00000531104 MTBPQ96DY7 904 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SGSM3Q96HU1 749 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SERAC1Q96JX3 654 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SAMD11Q96NU1 681 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 APOL2Q9BQE5 337 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 HTATIP2Q9BUP3 242 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 FICDQ9BVA6 458 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 KIF9Q9HAQ2 790 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 TRPC7Q9HCX4 862 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 NT5MQ9NPB1 228 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 MKS1Q9NXB0 559 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 SMPD4Q9NXE4 827 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 PRKAG3Q9UGI9 489 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 ZNF510Q9Y2H8 683 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 OR51B4Q9Y5P0 310 aa11.09□□□□□ -0.63
SRPRA-205ENST00000531104 MYO18AQ92614 2054 aaKnown RBP11.08□□□□□ -0.63
SRPRA-205ENST00000531104 TRAV19A0A0A6YYK7 116 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.08□□□□□ -0.64
SRPRA-205ENST00000531104 LOC285095A0A1B0GVY8 99 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 MUSKO15146 869 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 UGT1A9O60656 530 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 ZMPSTE24O75844 475 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 ASMTLO95671 621 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 MT-ND3P03897 115 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 RHOCP08134 193 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 HNRNPA1P09651 372 aaKnown RBP eCLIP11.08□□□□□ -0.64
SRPRA-205ENST00000531104 CNTFP26441 200 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 CA8P35219 290 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 IRS1P35568 1242 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 ETFBP38117 255 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 CCR2P41597 374 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 NEK3P51956 506 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 SEC24CP53992 1094 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 WDR4P57081 412 aaKnown RBP11.08□□□□□ -0.64
SRPRA-205ENST00000531104 ERVK-21P61565 698 aa11.08□□□□□ -0.64
SRPRA-205ENST00000531104 DSC2Q02487 901 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms