RNA–Protein interactions for RNA: ENST00000530886.5

CSDE1-214, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 3,459 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-214ENST00000530886 POLR2IP36954 125 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 CAPGP40121 348 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TNNI2P48788 182 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SNRPFP62306 86 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 VAC14Q08AM6 782 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 MAMLD1Q13495 774 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 HIST2H2ACQ16777 129 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ANO4Q32M45 955 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF484Q5JVG2 852 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 LIN9Q5TKA1 542 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 WDR78Q5VTH9 848 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 BROXQ5VW32 411 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 UNC5BQ8IZJ1 945 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SCML4Q8N228 414 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 FAM109AQ8N4B1 249 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 BEST2Q8NFU1 509 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 OR6F1Q8NGZ6 308 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZFP90Q8TF47 636 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 LRRC39Q96DD0 335 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SLC39A13Q96H72 371 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF560Q96MR9 790 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 COQ7Q99807 217 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 C9orf16Q9BUW7 83 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SEZ6LQ9BYH1 1024 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 C12orf4Q9NQ89 552 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 NUP50Q9UKX7 468 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 COL11A2P13942 1736 aaPredicted RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TCP10L2B9ZVM9 353 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TRIM77I1YAP6 450 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TNPO2O14787 897 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 UPK1BO75841 260 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 EIF2DP41214 584 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 PTPN9P43378 593 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 PKNOX1P55347 436 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 VPS72Q15906 364 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SMU1Q2TAY7 513 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 TJAP1Q5JTD0 557 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 UBE2UQ5VVX9 321 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 PRSS48Q7RTY5 328 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZCCHC7Q8N3Z6 543 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 RCN3Q96D15 328 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 UBXN10Q96LJ8 280 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 BEGAINQ9BUH8 593 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 NOL6Q9H6R4 1146 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 NOL11Q9H8H0 719 aaKnown RBP8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF304Q9HCX3 659 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 DCDC2Q9UHG0 476 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZNF221Q9UK13 617 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 ZBTB21Q9ULJ3 1066 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 SNX13Q9Y5W8 968 aa8.25□□□□□ -1.09
CSDE1-214ENST00000530886 KAT6AQ92794 2004 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 AHDC1Q5TGY3 1603 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 IGLV3-22A0A075B6J6 115 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SAC3D1A6NKF1 404 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CXorf49A8MYA2 514 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 H2AFYO75367 372 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ALDH1A2O94788 518 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 NADKO95544 446 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 KRT8P05787 483 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 IL2RBP14784 551 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CES1P23141 567 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 IL12AP29459 219 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MAGEA6P43360 314 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CYP2J2P51589 502 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PRAMEP78395 509 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ENPEPQ07075 957 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 KRR1Q13601 381 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CTF1Q16619 201 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SLC9A4Q6AI14 798 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PHF13Q86YI8 300 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 EPHX4Q8IUS5 362 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 LYSMD2Q8IV50 215 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SFRP1Q8N474 314 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TDRD5Q8NAT2 981 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SLC45A3Q96JT2 553 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CALN1Q9BXU9 219 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 LHPPQ9H008 270 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 UNC93B1Q9H1C4 597 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 POPDC2Q9HBU9 364 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ZBTB26Q9HCK0 441 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 TCF7L2Q9NQB0 619 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MRGBPQ9NV56 204 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GMIPQ9P107 970 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 IFT80Q9P2H3 777 aaPredicted RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 CD300AQ9UGN4 299 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PACSIN3Q9UKS6 424 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 BCS1LQ9Y276 419 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PCDHGA7Q9Y5G6 932 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ERVH48-1M5A8F1 160 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 ZBTB39O15060 712 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 MAN1A2O60476 641 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 FAM13AO94988 1023 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 KRT1P04264 644 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 JUNP05412 331 aaKnown RBP8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GLULP15104 373 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 DDOSTP39656 456 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 SERPINB10P48595 397 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 PLA2G16P53816 162 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GDF10P55107 478 aa8.24□□□□□ -1.09
CSDE1-214ENST00000530886 GABARAPL2P60520 117 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms