RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 INHBEP58166 350 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 PPP3CAQ08209 521 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 TOP3AQ13472 1001 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 NOMO2Q5JPE7 1267 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 GATAD2AQ86YP4 633 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 CREG2Q8IUH2 290 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 FAM126BQ8IXS8 530 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ZNF276Q8N554 614 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 RDH11Q8TC12 318 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 EPS8L1Q8TE68 723 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 DLG3Q92796 817 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 ART4Q93070 314 aa8.59□□□□□ -1.03
CTNND1-227ENST00000530748 RMND5BQ96G75 393 aaPredicted RBP8.59□□□□□ -1.03
CTNND1-227ENST00000530748 A8MX80 341 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 SPATA31C2B4DYI2 1134 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 NDUFS2O75306 463 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PDE5AO76074 875 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TNFAIP8O95379 198 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 FGF19O95750 216 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MT-CO1P00395 513 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ANXA5P08758 320 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 UQCRBP14927 111 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ME2P23368 584 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CXCR2P25025 360 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CRYBB1P53674 252 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 AADACL2Q6P093 401 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 LPCAT2Q7L5N7 544 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 LRRC49Q8IUZ0 686 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DENND1CQ8IV53 801 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 WDR36Q8NI36 951 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 STAG3L4Q8TBR4 150 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 NELL1Q92832 810 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TMEM237Q96Q45 408 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 GAD1Q99259 594 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ZNF670Q9BS34 389 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MLPHQ9BV36 600 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 SENP6Q9GZR1 1112 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ALG9Q9H6U8 611 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ATAD3AQ9NVI7 634 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 GIT1Q9Y2X7 761 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TRIM17Q9Y577 477 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 LOC102724159A0A0B4J2E5 919 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MLYCDO95822 493 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MYL12AP19105 171 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ATP6V1C1P21283 382 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 HOXA10P31260 410 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 AIF1P55008 147 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PWP2Q15269 919 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PPP1R15BQ5SWA1 713 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 LRRC74BQ6ZQY2 392 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ZCCHC23Q6ZST2 131 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 NET1Q7Z628 596 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TMEM161BQ8NDZ6 487 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 HELQQ8TDG4 1101 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ATL1Q8WXF7 558 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 HSFY1Q96LI6 401 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 RNF145Q96MT1 663 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ATP13A3Q9H7F0 1226 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 NRDE2Q9H7Z3 1164 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PTPRHQ9HD43 1115 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DIABLOQ9NR28 239 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ASAH2Q9NR71 780 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ARIH1Q9Y4X5 557 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PCDHGA4Q9Y5G9 962 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 FTH1P02794 183 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 VAV1P15498 845 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 LRPAP1P30533 357 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DDR1Q08345 913 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DGKKQ5KSL6 1271 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TXNDC11Q6PKC3 985 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 FAM71AQ8IYT1 594 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TOP6BLQ8N6T0 577 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 HJURPQ8NCD3 748 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 BHLHE22Q8NFJ8 381 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 FBXO6Q9NRD1 293 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 COPG2Q9UBF2 871 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 A0A0B4J269 797 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 C1QTNF3-AMACRE9PGA6 284 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MEIS2O14770 477 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ZBTB22O15209 634 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PARNO95453 639 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ENO2P09104 434 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CCNB1P14635 433 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TNFSF9P41273 254 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 CAPSQ13938 189 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 ZC3H12AQ5D1E8 599 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PLEKHA7Q6IQ23 1121 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 DCLRE1AQ6PJP8 1040 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 VSIG10LQ86VR7 867 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PALB2Q86YC2 1186 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TRAPPC5Q8IUR0 188 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 AADATQ8N5Z0 425 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 COPS5Q92905 334 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 PPP1R14AQ96A00 147 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MIEF2Q96C03 454 aa8.58□□□□□ -1.04
CTNND1-227ENST00000530748 C2orf49Q9BVC5 232 aaPredicted RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 TRIT1Q9H3H1 467 aaKnown RBP8.58□□□□□ -1.04
CTNND1-227ENST00000530748 MSRAQ9UJ68 235 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms