RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 XPO1O14980 1071 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 MFAP3LO75121 409 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SCG5P05408 212 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 RHOP08100 348 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SNRPB2P08579 225 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 FERP16591 822 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 HNRNPH3P31942 346 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 CASP14P31944 242 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 ACVRL1P37023 503 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 PDE6CP51160 858 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 BPIFB4P59827 614 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 ZBED6P86452 979 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 FMO1Q01740 532 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 CDR2Q01850 454 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 TRIM14Q14142 442 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 VEPH1Q14D04 833 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SMAD2Q15796 467 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 RAB41Q5JT25 222 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 TMCO4Q5TGY1 634 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 PMF1Q6P1K2 205 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 TEPPQ6URK8 271 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 DENND5BQ6ZUT9 1274 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 GAREM2Q75VX8 874 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 ITIH5Q86UX2 942 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SCAMP5Q8TAC9 235 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 UBA3Q8TBC4 463 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 PHOSPHO1Q8TCT1 267 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SYN2Q92777 582 aaPredicted RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 SECISBP2LQ93073 1101 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 TCEAL4Q96EI5 215 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 ZSWIM3Q96MP5 696 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 DNAJC7Q99615 494 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 LHX5Q9H2C1 402 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 POMKQ9H5K3 350 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 EPHX3Q9H6B9 360 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 WDR6Q9NNW5 1121 aaKnown RBP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 HESX1Q9UBX0 185 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 CROTQ9UKG9 612 aa9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.17□□□□□ -0.94
CCDC90B-217ENST00000530253 GPR42O15529 346 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 MED7O43513 233 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ADCY5O95622 1261 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 MMEP08473 750 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ZDHHC11BP0C7U3 371 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 CSH1P0DML2 217 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 CSH2P0DML3 217 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PTPN2P17706 415 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ANXA13P27216 316 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 MTHFRP42898 656 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PGFP49763 221 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 KIF11P52732 1056 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 NOMO3P69849 1222 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 GOLGA8FQ08AF8 430 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 GOLGA8DPQ0D2H9 430 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PDCLQ13371 301 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 LSAMPQ13449 338 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ASIC2Q16515 512 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PTPN20Q4JDL3 420 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PABPC1LQ4VXU2 614 aaKnown RBP9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 TAF3Q5VWG9 929 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 CES5AQ6NT32 575 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 WDR59Q6PJI9 974 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF677Q86XU0 584 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PASD1Q8IV76 773 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 NUP93Q8N1F7 819 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 C1orf131Q8NDD1 294 aaKnown RBP9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ITFG1Q8TB96 612 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 BTN2A2Q8WVV5 523 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 KCTD13Q8WZ19 329 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF512Q96ME7 567 aaPredicted RBP9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 RIPOR3Q96MK2 946 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 NECTIN4Q96NY8 510 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 PCDHB18PQ96TA0 734 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 EPB41L1Q9H4G0 881 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 GRPEL1Q9HAV7 217 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 ASAH2Q9NR71 780 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 COMMD8Q9NX08 183 aa9.16□□□□□ -0.94
CCDC90B-217ENST00000530253 OBSL1O75147 1896 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 TCRBV5S2A0A599 114 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 RTN3O95197 1032 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 LSM8O95777 96 aaKnown RBP9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 UNGP13051 313 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 GJA1P17302 382 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 CEBPBP17676 345 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 GABRR2P28476 465 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 KRT9P35527 623 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 ECI1P42126 302 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 RGS7P49802 495 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 ARID5AQ03989 594 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 ATAT1Q5SQI0 421 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 STXBP5Q5T5C0 1151 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 SFMBT2Q5VUG0 894 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 PDZD4Q76G19 769 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 CCDC186Q7Z3E2 898 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 ZNF571Q7Z3V5 609 aaPredicted RBP9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 SCD5Q86SK9 330 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 TMEM110Q86TL2 294 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 FMNL3Q8IVF7 1028 aa9.15□□□□□ -0.94
CCDC90B-217ENST00000530253 CCDC103Q8IW40 242 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms