RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 ARSEP51690 589 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CDH6P55285 790 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 TAS2R40P59535 323 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 KRT81Q14533 505 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CCDC6Q16204 474 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 INO80DQ53TQ3 878 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CARD16Q5EG05 197 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 FAM46CQ5VWP2 391 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 LYSMD4Q5XG99 296 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 LEKR1Q6ZMV7 388 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ARMCX6Q7L4S7 300 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ZNF354CQ86Y25 554 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ARHGAP12Q8IWW6 846 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 PLPP6Q8IY26 295 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 KIAA2013Q8IYS2 634 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 AADATQ8N5Z0 425 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 LZTR1Q8N653 840 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 PCDH20Q8N6Y1 951 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 SPC24Q8NBT2 197 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 TMIEQ8NEW7 156 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 GANCQ8TET4 914 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 TSC1Q92574 1164 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 PIGKQ92643 395 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CELF6Q96J87 481 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 CSPG4P5Q96PW8 444 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 OMDQ99983 421 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 BTBD1Q9H0C5 482 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 PCED1AQ9H1Q7 454 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 NEUROG2Q9H2A3 272 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 TNKS2Q9H2K2 1166 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 SGK2Q9HBY8 427 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 VPS45Q9NRW7 570 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 RCOR3Q9P2K3 495 aaPredicted RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 SERGEFQ9UGK8 458 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 SARDHQ9UL12 918 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 FZD4Q9ULV1 537 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 FCF1Q9Y324 198 aaKnown RBP12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 NUMA1Q14980 2115 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 GON4LQ3T8J9 2241 aa12.92□□□□□ -0.34
CCDC90B-216ENST00000529856 ARHGAP42A6NI28 874 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 METTL12A8MUP2 240 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 C1QTNF3-AMACRE9PGA6 284 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 CTSLP07711 333 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 KRT7P08729 469 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 ITPKAP23677 461 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 DPP6P42658 865 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 RECQLP46063 649 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 PAPOLAP51003 745 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 DNA2P51530 1060 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 METAP1P53582 386 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 HADHBP55084 474 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 PEAR1Q5VY43 1037 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 RAD9BQ6WBX8 426 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 DPY19L3Q6ZPD9 716 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 SYT12Q8IV01 421 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 TMEM139Q8IV31 216 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 HDDC3Q8N4P3 179 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 NPWQ8N729 165 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 KCTD6Q8NC69 237 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 CHST14Q8NCH0 376 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 PIP4K2CQ8TBX8 421 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 CASKIN2Q8WXE0 1202 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 HSPA12BQ96MM6 686 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 BAG1Q99933 345 aaPredicted RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 LUC7LQ9NQ29 371 aaKnown RBP12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 TMEM74BQ9NUR3 256 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 ETNK2Q9NVF9 386 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 PILRBQ9UKJ0 227 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 TFR2Q9UP52 801 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 GVINP1Q7Z2Y8 2422 aa12.91□□□□□ -0.34
CCDC90B-216ENST00000529856 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 J3KR12 359 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 FOXD2O60548 495 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 PRAMEF11O60813 436 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 RNASEH2AO75792 299 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 TMCC1O94876 653 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 SEMA4FO95754 770 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 PRNPP04156 253 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 CD48P09326 243 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 HOXD12P35452 270 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 DRD3P35462 400 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 GJC1P36383 396 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 SLC1A1P43005 524 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 NOP2P46087 812 aaKnown RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 DPYSL3Q14195 570 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 PDK2Q15119 407 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 ARSIQ5FYB1 569 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 WDR45BQ5MNZ6 344 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 SYCP2LQ5T4T6 812 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 DCAF12L1Q5VU92 463 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 TMCO3Q6UWJ1 677 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 PRR23CQ6ZRP0 262 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 NETO2Q8NC67 525 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 DNASE2BQ8WZ79 361 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 FAM131CQ96AQ9 280 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 HEPHQ9BQS7 1158 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 SMOC1Q9H4F8 434 aa12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 C6orf106Q9H6K1 298 aaPredicted RBP12.9□□□□□ -0.34
CCDC90B-216ENST00000529856 PDFQ9HBH1 243 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms