RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 TAS2R38P59533 333 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 KRT83P78385 493 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 CETN1Q12798 172 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 MTA1Q13330 715 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 NR0B2Q15466 257 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 CDKN3Q16667 212 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 ZNF284Q2VY69 593 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 ARL13BQ3SXY8 428 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 MSS51Q4VC12 460 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 ZNF542PQ5EBM4 170 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 PIP5KL1Q5T9C9 394 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 SYPL2Q5VXT5 272 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 Q6ZSR6 202 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 EFL1Q7Z2Z2 1120 aaKnown RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 ABI3BPQ7Z7G0 1075 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 UBR7Q8N806 425 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 GLMNQ92990 594 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 CCDC34Q96HJ3 373 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 PPP1R16AQ96I34 528 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 RPRD1AQ96P16 312 aaPredicted RBP9.22□□□□□ -0.93
VPS11-203ENST00000529545 NT5C1BQ96P26 610 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 MED15Q96RN5 788 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 IL12RB2Q99665 862 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 FEM1AQ9BSK4 669 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 POPDC2Q9HBU9 364 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 ENTPD2Q9Y5L3 495 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 HS3ST3A1Q9Y663 406 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 CSNK1G3Q9Y6M4 447 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 SPTA1P02549 2419 aa9.22□□□□□ -0.93
VPS11-203ENST00000529545 PIEZO2Q9H5I5 2752 aa9.21□□□□□ -0.93
VPS11-203ENST00000529545 CCDC187A0A096LP49 1063 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 LY6G6EA0A0G2JKS1 128 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 CDRT15L2A8MXV6 281 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 SFTPCP11686 197 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 KRT10P13645 584 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 CCR1P32246 355 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 RECQLP46063 649 aaPredicted RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 YWHAZP63104 245 aaKnown RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 SKOR1P84550 965 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 CDK17Q00537 523 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 DNM1Q05193 864 aaKnown RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 DPYDQ12882 1025 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 OR6B2Q6IFH4 312 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 CXorf57Q6NSI4 855 aaKnown RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 GUSBP11Q6P575 273 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ATG14Q6ZNE5 492 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 USP53Q70EK8 1073 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ERN2Q76MJ5 926 aaKnown RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 PARGQ86W56 976 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 CIR1Q86X95 450 aaPredicted RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 SLC22A18ASQ8N1D0 253 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 PPM1KQ8N3J5 372 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 SH2D3CQ8N5H7 860 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ATP11CQ8NB49 1132 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ZNF548Q8NEK5 533 aaPredicted RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 TMIEQ8NEW7 156 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 NAT6Q93015 286 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ARRDC3Q96B67 414 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 FEM1CQ96JP0 617 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 NOX5Q96PH1 765 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 MUC3BQ9H195 1237 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 FAM204AQ9H8W3 233 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 ARMCX3Q9UH62 379 aaPredicted RBP9.21□□□□□ -0.94
VPS11-203ENST00000529545 SALL4Q9UJQ4 1053 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 U3KQA8 63 aa9.21□□□□□ -0.94
VPS11-203ENST00000529545 SPTY2D1-AS1A0A0U1RR47 76 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 EME2A4GXA9 379 aaPredicted RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 FPGTO14772 594 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 TPP1O14773 563 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 AQP9O43315 295 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 CLDN11O75508 207 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 CSF2P04141 144 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 ITGA2BP08514 1039 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 NME1P15531 152 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 JUNDP17535 347 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 RABIFP47224 123 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 RPS21P63220 83 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 FKBP3Q00688 224 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 CLN3Q13286 438 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SGCGQ13326 291 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SPIDRQ14159 915 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 FZD2Q14332 565 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 DEFB133Q30KQ1 61 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 KIAA1161Q6NSJ0 714 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 FBXL22Q6P050 247 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 BRICD5Q6PL45 260 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 KYAT3Q6YP21 454 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 ZNF574Q6ZN55 896 aaPredicted RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 GCNT7Q6ZNI0 430 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 CLEC14AQ86T13 490 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 LMX1AQ8TE12 382 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 BTN2A2Q8WVV5 523 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 ALG14Q96F25 216 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 BMFQ96LC9 184 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 PRMT1Q99873 361 aaKnown RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 ZSWIM1Q9BR11 485 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 C2orf49Q9BVC5 232 aaPredicted RBP9.2□□□□□ -0.94
VPS11-203ENST00000529545 HDAC8Q9BY41 377 aa9.2□□□□□ -0.94
VPS11-203ENST00000529545 SLC17A9Q9BYT1 436 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms