RNA–Protein interactions for RNA: ENST00000528288.5

C11orf54-207, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best) BASIC

Gene C11orf54, Length 4,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-207ENST00000528288 PCDH20Q8N6Y1 951 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 EMID1Q96A84 441 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ELMO2Q96JJ3 720 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ILKAPQ9H0C8 392 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GBA3Q9H227 469 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 EIF2B3Q9NR50 452 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GTSE1Q9NYZ3 720 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GTF2IRD1Q9UHL9 959 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 A0A1B0GVG6 124 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SMIM35A0A1B0GVV1 85 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 OR6B1O95007 311 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PGK1P00558 417 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 F2P00734 622 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TFEBP19484 476 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SOX11P35716 441 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 LBRQ14739 615 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CCDC153Q494R4 210 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TIGD5Q53EQ6 642 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TMCO4Q5TGY1 634 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 KCTD11Q693B1 232 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 FBXL19Q6PCT2 694 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PAXIP1Q6ZW49 1069 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 FBXW8Q8N3Y1 598 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TTC16Q8NEE8 873 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ACTRT2Q8TDY3 377 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SH3RF2Q8TEC5 729 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 EXT2Q93063 718 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MYLPFQ96A32 169 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SLC45A3Q96JT2 553 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 COPS7BQ9H9Q2 264 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TNFRSF12AQ9NP84 129 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ARHGAP26Q9UNA1 814 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CDY2AQ9Y6F7 541 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CDY1Q9Y6F8 540 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 HTTP42858 3142 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SF3B1O75533 1304 aaKnown RBP eCLIP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 C9JVG2 144 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 DLX3O60479 287 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 SLC35E2BP0CK96 405 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 KCNE1P15382 129 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PNPLA4P41247 253 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 DPP6P42658 865 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 NME5P56597 212 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MS4A2Q01362 244 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CSHL1Q14406 222 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 MMEL1Q495T6 779 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 FBXO48Q5FWF7 155 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 RBM20Q5T481 1227 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PGM2L1Q6PCE3 622 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PAOXQ6QHF9 649 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CYS1Q717R9 158 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 TFAP2DQ7Z6R9 452 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ZC3HC1Q86WB0 502 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 ZNF354CQ86Y25 554 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 DSELQ8IZU8 1212 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 CENPLQ8N0S6 344 aaPredicted RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GPR152Q8TDT2 470 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 PHF21BQ96EK2 531 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 C1orf21Q9H246 121 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 OXSMQ9NWU1 459 aa7.57□□□□□ -1.2
C11orf54-207ENST00000528288 GMPR2Q9P2T1 348 aaKnown RBP7.57□□□□□ -1.2
C11orf54-207ENST00000528288 H3BNX3 289 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 GRID2O43424 1007 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 XPOTO43592 962 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 GJB3O75712 270 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 B3GAT3O94766 335 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ITGB1P05556 798 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 NELFEP18615 380 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 KCNA5P22460 613 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 CRABP2P29373 138 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 GRIA2P42262 883 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 PAPOLAP51003 745 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ITKQ08881 620 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 TBCCQ15814 346 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 SEL1L3Q68CR1 1132 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 IQSEC1Q6DN90 963 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 CNSTQ6PJW8 725 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 SLC30A9Q6PML9 568 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 GK5Q6ZS86 529 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 LRRTM3Q86VH5 581 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 PDSS2Q86YH6 399 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 LSMEM2Q8N112 164 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 TMEM151AQ8N4L1 468 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 TOP6BLQ8N6T0 577 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 TEKT5Q96M29 485 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 KLHL5Q96PQ7 755 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 NAT9Q9BTE0 207 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 SPON1Q9HCB6 807 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 SPATS2LQ9NUQ6 558 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 RCOR3Q9P2K3 495 aaPredicted RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ST3GAL5Q9UNP4 418 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ASB3Q9Y575 518 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ATP6AP2A0A1C7CYW4 349 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 CCNT2O60583 730 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 ATP6AP2O75787 350 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 RPL14P50914 215 aaKnown RBP7.56□□□□□ -1.2
C11orf54-207ENST00000528288 TAS2R39P59534 338 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 SEMA3BQ13214 749 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 GRB14Q14449 540 aa7.56□□□□□ -1.2
C11orf54-207ENST00000528288 PPP1R3AQ16821 1122 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms