RNA–Protein interactions for RNA: ENST00000528165.5

CAPN1-214, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 2,828 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-214ENST00000528165 CCNYQ8ND76 341 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 CXorf38Q8TB03 319 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 KHSRPQ92945 711 aaKnown RBP eCLIP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 RPF2Q9H7B2 306 aaKnown RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 SPAG4Q9NPE6 437 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 FAM49BQ9NUQ9 324 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TMX2-CTNND1H3BSU7 103 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 CLASP2O75122 1294 aaKnown RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 DDHD2O94830 711 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 COL6A2P12110 1019 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ATICP31939 592 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 BCAP31P51572 246 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 PRKCQQ04759 706 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 MAPRE2Q15555 327 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 TREML2Q5T2D2 321 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 IER5Q5VY09 327 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 LRRC8EQ6NSJ5 796 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 LYSMD3Q7Z3D4 306 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 CPNE9Q8IYJ1 553 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ANKFN1Q8N957 763 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 NETO2Q8NC67 525 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 ZNF420Q8TAQ5 688 aaPredicted RBP14.88□□□□□ -0.03
CAPN1-214ENST00000528165 HPDLQ96IR7 371 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 VPS39Q96JC1 886 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 BFARQ9NZS9 450 aa14.88□□□□□ -0.03
CAPN1-214ENST00000528165 PRORSD1PA6NEY8 169 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TRPC5OSA6NMA1 111 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 H3BMQ9 156 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TRIM24O15164 1050 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 XPOTO43592 962 aaKnown RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 SEC24DO94855 1032 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 YBX3P16989 372 aaKnown RBP eCLIP14.87□□□□□ -0.035e-9■■□□□ 13.8
CAPN1-214ENST00000528165 TTKP33981 857 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 PPIL2Q13356 520 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 OLIG2Q13516 323 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 BTG3Q14201 252 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 FKBP1CQ5VVH2 108 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 GPR107Q5VW38 600 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 EEF1DP3Q658K8 133 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 XKR5Q6UX68 686 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 CENPSQ8N2Z9 138 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 CCNYL1Q8N7R7 359 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 ACVR1CQ8NER5 493 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TBC1D15Q8TC07 691 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 ADAMTS16Q8TE57 1224 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 SGF29Q96ES7 293 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 DUS3LQ96G46 650 aaKnown RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 COG8Q96MW5 612 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TCF12Q99081 682 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 NT5C1AQ9BXI3 368 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UPF3AQ9H1J1 476 aaKnown RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TRPC7Q9HCX4 862 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 KIAA1257Q9ULG3 409 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 VANGL2Q9ULK5 521 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 ANKRD6Q9Y2G4 727 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 SNX9Q9Y5X1 595 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 A0A1W2PPW3 197 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 INO80B-WBP1J3KQ70 363 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 B4GALT5O43286 388 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 MFSD11O43934 449 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 GNAO1P09471 354 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UGT1A6P19224 532 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UGT1A1P22309 533 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UGT1A4P22310 534 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UGT1A3P35503 534 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 UGT1A5P35504 534 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 HALP42357 657 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 STAT5BP51692 787 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 MXD4Q14582 209 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 ANO4Q32M45 955 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 FAM83AQ86UY5 434 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 TRIM50Q86XT4 487 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 LSMEM2Q8N112 164 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 DNAAF3Q8N9W5 541 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 ZNF668Q96K58 619 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 NPLQ9BXD5 320 aaPredicted RBP14.87□□□□□ -0.03
CAPN1-214ENST00000528165 B3GNT5Q9BYG0 378 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 PTPRHQ9HD43 1115 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 CACNA2D2Q9NY47 1150 aa14.87□□□□□ -0.03
CAPN1-214ENST00000528165 SAC3D1A6NKF1 404 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 ZNF839A8K0R7 811 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 LACTBL1A8MY62 500 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 TMEM233B4DJY2 109 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 USP12O75317 370 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 BMP2P12643 396 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 CSE1LP55060 971 aaKnown RBP14.86□□□□□ -0.03
CAPN1-214ENST00000528165 NME5P56597 212 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 ATP1A4Q13733 1029 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 REP15Q6BDI9 236 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 OGFOD2Q6N063 350 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 PID1Q7Z2X4 250 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 TMEM135Q86UB9 458 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 LRRC71Q8N4P6 559 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 CCDC185Q8N715 623 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 TERB1Q8NA31 727 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 GPATCH1Q9BRR8 931 aaKnown RBP14.86□□□□□ -0.03
CAPN1-214ENST00000528165 C2orf40Q9H1Z8 148 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 SMOXQ9NWM0 555 aa14.86□□□□□ -0.03
CAPN1-214ENST00000528165 ITGB1BP2Q9UKP3 347 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms