RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RNGTTO60942 597 aaKnown RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 MOCS2O96007 188 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ERBB2P04626 1255 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 KRT10P13645 584 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 UCHL3P15374 230 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 CYP11B1P15538 503 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 MAT2AP31153 395 aaKnown RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 NNMTP40261 264 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 VASPP50552 380 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 INHBCP55103 352 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PPP2CBP62714 309 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PPP2CAP67775 309 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PITX1P78337 314 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ECT2LQ008S8 904 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 CDH18Q13634 790 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ELAVL3Q14576 367 aaKnown RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ISXQ2M1V0 245 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 C5orf22Q49AR2 442 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PTPN20Q4JDL3 420 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 C3orf38Q5JPI3 329 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PITRM1Q5JRX3 1037 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ACBD5Q5T8D3 534 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 CDKAL1Q5VV42 579 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 RAP1GAP2Q684P5 730 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 OR6B2Q6IFH4 312 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 FAM183BPQ6ZVS7 135 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 DSG4Q86SJ6 1040 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 CHSY1Q86X52 802 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PASD1Q8IV76 773 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 STK40Q8N2I9 435 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ARL14Q8N4G2 192 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 MAPK15Q8TD08 544 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 NT5C3BQ969T7 300 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 C18orf8Q96DM3 657 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PGAP3Q96FM1 320 aaPredicted RBP10.8□□□□□ -0.68
CPSF1-203ENST00000527916 MRGPRX3Q96LB0 322 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 GBP4Q96PP9 640 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PPP1R9BQ96SB3 815 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 FAM129BQ96TA1 746 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ARHGAP9Q9BRR9 750 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 OSBPL2Q9H1P3 480 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 DDIT4Q9NX09 232 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ARHGAP20Q9P2F6 1191 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ERVW-1Q9UQF0 538 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 PCDHGA8Q9Y5G5 932 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 FHOD1Q9Y613 1164 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 ITIH6Q6UXX5 1313 aa10.8□□□□□ -0.68
CPSF1-203ENST00000527916 TCAF2A6NFQ2 919 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 RIOK3O14730 519 aaKnown RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 TERTO14746 1132 aaKnown RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 LZTS3O60299 673 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 DAB1O75553 588 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 LSM8O95777 96 aaKnown RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 F9P00740 461 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 PNMA6AP0CW24 399 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 SFTPCP11686 197 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 MZF1P28698 734 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 MLLT3P42568 568 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 SKOR1P84550 965 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 SULT2A1Q06520 285 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 RAPGEF1Q13905 1077 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 ZSCAN23Q3MJ62 389 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 ARL13BQ3SXY8 428 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 HSP90AA4PQ58FG1 418 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 BRMS1LQ5PSV4 323 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 RABGAP1LQ5R372 815 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 FAM46CQ5VWP2 391 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 ARCQ7LC44 396 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 TRIM69Q86WT6 500 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 ZNF677Q86XU0 584 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 RNF34Q969K3 372 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 APOLD1Q96LR9 279 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 CCNL2Q96S94 520 aaPredicted RBP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 NPY6RQ99463 290 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 DUSP23Q9BVJ7 150 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 PDCL3Q9H2J4 239 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 SYNCQ9H7C4 482 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 FAM204AQ9H8W3 233 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 UCKL1Q9NWZ5 548 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.79□□□□□ -0.68
CPSF1-203ENST00000527916 NLGN3Q9NZ94 848 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 NCKIPSDQ9NZQ3 722 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 SEPT3Q9UH03 358 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 DOCK9Q9BZ29 2069 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 BSNQ9UPA5 3926 aa10.79□□□□□ -0.68
CPSF1-203ENST00000527916 DOCK4Q8N1I0 1966 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 LRRC10BA6NIK2 292 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 F8VZ95 297 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 GOLGA6L22H0YM25 854 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 M0QYT0 321 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 PES1O00541 588 aaKnown RBP10.78□□□□□ -0.68
CPSF1-203ENST00000527916 PLRG1O43660 514 aaKnown RBP10.78□□□□□ -0.68
CPSF1-203ENST00000527916 GRAP2O75791 330 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 TPM2P07951 284 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 THEGLP0DJG4 465 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 DRD3P35462 400 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 CXCR3P49682 368 aa10.78□□□□□ -0.68
CPSF1-203ENST00000527916 AUHQ13825 339 aaKnown RBP10.78□□□□□ -0.68
CPSF1-203ENST00000527916 FBXL22Q6P050 247 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms